Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ACBD3-AS1 (ACBD3 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) ACBD3-AS1
LocusID (NCBI) 107985353
Atlas_Id 78898
Location 1q42.12  [Link to chromosome band 1q42]
Location_base_pair Starts at 226148003 and ends at 226154977 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ACBD3-AS1   40701
Cards
Entrez_Gene (NCBI)ACBD3-AS1  107985353  ACBD3 antisense RNA 1
Aliases
GeneCards (Weizmann)ACBD3-AS1
Ensembl hg19 (Hinxton)ENSG00000234478 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234478 [Gene_View]  chr1:226148003-226154977 [Contig_View]  ACBD3-AS1 [Vega]
ICGC DataPortalENSG00000234478
TCGA cBioPortalACBD3-AS1
AceView (NCBI)ACBD3-AS1
Genatlas (Paris)ACBD3-AS1
WikiGenes107985353
SOURCE (Princeton)ACBD3-AS1
Genetics Home Reference (NIH)ACBD3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ACBD3-AS1  -     chr1:226148003-226154977 +  1q42.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ACBD3-AS1  -     1q42.12   [Description]    (hg19-Feb_2009)
EnsemblACBD3-AS1 - 1q42.12 [CytoView hg19]  ACBD3-AS1 - 1q42.12 [CytoView hg38]
Mapping of homologs : NCBIACBD3-AS1 [Mapview hg19]  ACBD3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW511419
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ACBD3-AS1
Cluster EST : UnigeneHs.735455 [ NCBI ]
CGAP (NCI)Hs.735455
Alternative Splicing GalleryENSG00000234478
Gene ExpressionACBD3-AS1 [ NCBI-GEO ]   ACBD3-AS1 [ EBI - ARRAY_EXPRESS ]   ACBD3-AS1 [ SEEK ]   ACBD3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ACBD3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107985353
GTEX Portal (Tissue expression)ACBD3-AS1
Human Protein AtlasENSG00000234478-ACBD3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ACBD3-AS1
DMDM Disease mutations107985353
Blocks (Seattle)ACBD3-AS1
Human Protein Atlas [tissue]ENSG00000234478-ACBD3-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000234478
BioGRIDACBD3-AS1
STRING (EMBL)ACBD3-AS1
ZODIACACBD3-AS1
Ontologies - Pathways
Huge Navigator ACBD3-AS1 [HugePedia]
snp3D : Map Gene to Disease107985353
BioCentury BCIQACBD3-AS1
ClinGenACBD3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107985353
Clinical trialACBD3-AS1
Miscellaneous
canSAR (ICR)ACBD3-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineACBD3-AS1
EVEXACBD3-AS1
GoPubMedACBD3-AS1
iHOPACBD3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 12:59:07 CET 2017

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