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ACBD7 (acyl-CoA binding domain containing 7)

Identity

Alias_namesacyl-Coenzyme A binding domain containing 7
Alias_symbol (synonym)FLJ38219
bA455B2.2
Other alias
HGNC (Hugo) ACBD7
LocusID (NCBI) 414149
Atlas_Id 60080
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 15117474 and ends at 15130775 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ACBD7   17715
Cards
Entrez_Gene (NCBI)ACBD7  414149  acyl-CoA binding domain containing 7
AliasesbA455B2.2
GeneCards (Weizmann)ACBD7
Ensembl hg19 (Hinxton) [Gene_View]  chr10:15117474-15130775 [Contig_View]  ACBD7 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:15117474-15130775 [Contig_View]  ACBD7 [Vega]
TCGA cBioPortalACBD7
AceView (NCBI)ACBD7
Genatlas (Paris)ACBD7
WikiGenes414149
SOURCE (Princeton)ACBD7
Genetics Home Reference (NIH)ACBD7
Genomic and cartography
GoldenPath hg19 (UCSC)ACBD7  -     chr10:15117474-15130775 -  10p13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ACBD7  -     10p13   [Description]    (hg38-Dec_2013)
EnsemblACBD7 - 10p13 [CytoView hg19]  ACBD7 - 10p13 [CytoView hg38]
Mapping of homologs : NCBIACBD7 [Mapview hg19]  ACBD7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095538 AK295169 BC029526 BX114172 JF432125
RefSeq transcript (Entrez)NM_001039844
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_008705 NW_004929370
Consensus coding sequences : CCDS (NCBI)ACBD7
Cluster EST : UnigeneHs.723069 [ NCBI ]
CGAP (NCI)Hs.723069
Gene ExpressionACBD7 [ NCBI-GEO ]   ACBD7 [ EBI - ARRAY_EXPRESS ]   ACBD7 [ SEEK ]   ACBD7 [ MEM ]
Gene Expression Viewer (FireBrowse)ACBD7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)414149
GTEX Portal (Tissue expression)ACBD7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N6N7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N6N7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N6N7
Splice isoforms : SwissVarQ8N6N7
PhosPhoSitePlusQ8N6N7
Domaine pattern : Prosite (Expaxy)ACB_2 (PS51228)   
Domains : Interpro (EBI)Acyl-CoA-binding_protein    FERM/acyl-CoA-bd_prot_3-hlx   
Domain families : Pfam (Sanger)ACBP (PF00887)   
Domain families : Pfam (NCBI)pfam00887   
Conserved Domain (NCBI)ACBD7
DMDM Disease mutations414149
Blocks (Seattle)ACBD7
PDB (SRS)3EPY   
PDB (PDBSum)3EPY   
PDB (IMB)3EPY   
PDB (RSDB)3EPY   
Structural Biology KnowledgeBase3EPY   
SCOP (Structural Classification of Proteins)3EPY   
CATH (Classification of proteins structures)3EPY   
SuperfamilyQ8N6N7
Peptide AtlasQ8N6N7
IPIIPI00398874   
Protein Interaction databases
DIP (DOE-UCLA)Q8N6N7
IntAct (EBI)Q8N6N7
BioGRIDACBD7
STRING (EMBL)ACBD7
ZODIACACBD7
Ontologies - Pathways
QuickGOQ8N6N7
Ontology : AmiGOfatty-acyl-CoA binding  lipid binding  
Ontology : EGO-EBIfatty-acyl-CoA binding  lipid binding  
NDEx NetworkACBD7
Atlas of Cancer Signalling NetworkACBD7
Wikipedia pathwaysACBD7
Orthology - Evolution
OrthoDB414149
Phylogenetic Trees/Animal Genes : TreeFamACBD7
HOVERGENQ8N6N7
HOGENOMQ8N6N7
Homologs : HomoloGeneACBD7
Homology/Alignments : Family Browser (UCSC)ACBD7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerACBD7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACBD7
dbVarACBD7
ClinVarACBD7
1000_GenomesACBD7 
Exome Variant ServerACBD7
ExAC (Exome Aggregation Consortium)ACBD7 (select the gene name)
Genetic variants : HAPMAP414149
Genomic Variants (DGV)ACBD7 [DGVbeta]
DECIPHER (Syndromes)10:15117474-15130775  
CONAN: Copy Number AnalysisACBD7 
Mutations
ICGC Data PortalACBD7 
TCGA Data PortalACBD7 
Broad Tumor PortalACBD7
OASIS PortalACBD7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICACBD7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDACBD7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ACBD7
DgiDB (Drug Gene Interaction Database)ACBD7
DoCM (Curated mutations)ACBD7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ACBD7 (select a term)
intoGenACBD7
Cancer3DACBD7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenACBD7
Genetic Testing Registry ACBD7
NextProtQ8N6N7 [Medical]
TSGene414149
GENETestsACBD7
Huge Navigator ACBD7 [HugePedia]
snp3D : Map Gene to Disease414149
BioCentury BCIQACBD7
ClinGenACBD7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414149
Chemical/Pharm GKB GenePA134884059
Clinical trialACBD7
Miscellaneous
canSAR (ICR)ACBD7 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineACBD7
EVEXACBD7
GoPubMedACBD7
iHOPACBD7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:53:28 CET 2017

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