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ACP1 (acid phosphatase 1, soluble)

Identity

Other namesHAAP
HGNC (Hugo) ACP1
LocusID (NCBI) 52
Location 2p25.3
Location_base_pair Starts at 264869 and ends at 272481 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ACP1   122
Cards
Entrez_Gene (NCBI)ACP1  52  acid phosphatase 1, soluble
GeneCards (Weizmann)ACP1
Ensembl hg19 (Hinxton)ENSG00000143727 [Gene_View]  chr2:264869-272481 [Contig_View]  ACP1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000143727 [Gene_View]  chr2:264869-272481 [Contig_View]  ACP1 [Vega]
ICGC DataPortalENSG00000143727
cBioPortalACP1
AceView (NCBI)ACP1
Genatlas (Paris)ACP1
WikiGenes52
SOURCE (Princeton)ACP1
Genomic and cartography
GoldenPath hg19 (UCSC)ACP1  -     chr2:264869-272481 +  2p25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ACP1  -     2p25.3   [Description]    (hg38-Dec_2013)
EnsemblACP1 - 2p25.3 [CytoView hg19]  ACP1 - 2p25.3 [CytoView hg38]
Mapping of homologs : NCBIACP1 [Mapview hg19]  ACP1 [Mapview hg38]
OMIM171500   
Gene and transcription
Genbank (Entrez)AB209838 AK289934 AK291861 BC007422 BC020699
RefSeq transcript (Entrez)NM_001040649 NM_004300 NM_007099 NM_177554
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_012035 NT_005334 NW_001838758 NW_004929296
Consensus coding sequences : CCDS (NCBI)ACP1
Cluster EST : UnigeneHs.558296 [ NCBI ]
CGAP (NCI)Hs.558296
Alternative Splicing : Fast-db (Paris)GSHG0016207
Alternative Splicing GalleryENSG00000143727
Gene ExpressionACP1 [ NCBI-GEO ]     ACP1 [ SEEK ]   ACP1 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP24666 (Uniprot)
NextProtP24666  [Medical]
With graphics : InterProP24666
Splice isoforms : SwissVarP24666 (Swissvar)
Catalytic activity : Enzyme3.1.3.48 [ Enzyme-Expasy ]   3.1.3.483.1.3.48 [ IntEnz-EBI ]   3.1.3.48 [ BRENDA ]   3.1.3.48 [ KEGG ]   
Domains : Interpro (EBI)Ptyr_pPase_SF    Tyr_Pase_low_mol_wt_mml    Tyr_phospatase/Ars_reductase    Tyr_phospatase_low_mol_wt   
Related proteins : CluSTrP24666
Domain families : Pfam (Sanger)LMWPc (PF01451)   
Domain families : Pfam (NCBI)pfam01451   
Domain families : Smart (EMBL)LMWPc (SM00226)  
DMDM Disease mutations52
Blocks (Seattle)P24666
PDB (SRS)1XWW    3N8I    5PNT   
PDB (PDBSum)1XWW    3N8I    5PNT   
PDB (IMB)1XWW    3N8I    5PNT   
PDB (RSDB)1XWW    3N8I    5PNT   
Human Protein AtlasENSG00000143727
Peptide AtlasP24666
HPRD08881
IPIIPI00219861   IPI00218847   IPI00410615   IPI00382703   IPI00759646   IPI00892543   IPI00893442   IPI00893203   
Protein Interaction databases
DIP (DOE-UCLA)P24666
IntAct (EBI)P24666
FunCoupENSG00000143727
BioGRIDACP1
IntegromeDBACP1
STRING (EMBL)ACP1
Ontologies - Pathways
QuickGOP24666
Ontology : AmiGOacid phosphatase activity  non-membrane spanning protein tyrosine phosphatase activity  protein binding  cytoplasm  cytoplasmic side of plasma membrane  peptidyl-tyrosine dephosphorylation  extracellular vesicular exosome  
Ontology : EGO-EBIacid phosphatase activity  non-membrane spanning protein tyrosine phosphatase activity  protein binding  cytoplasm  cytoplasmic side of plasma membrane  peptidyl-tyrosine dephosphorylation  extracellular vesicular exosome  
Pathways : KEGGRiboflavin metabolism    Adherens junction   
Protein Interaction DatabaseACP1
DoCM (Curated mutations)ACP1
Wikipedia pathwaysACP1
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerACP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACP1
dbVarACP1
ClinVarACP1
1000_GenomesACP1 
Exome Variant ServerACP1
SNP (GeneSNP Utah)ACP1
SNP : HGBaseACP1
Genetic variants : HAPMAPACP1
Genomic VariantsACP1  ACP1 [DGVbeta]
Mutations
ICGC Data PortalENSG00000143727 
Somatic Mutations in Cancer : COSMICACP1 
CONAN: Copy Number AnalysisACP1 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)2:264869-272481
Mutations and Diseases : HGMDACP1
OMIM171500   
MedgenACP1
NextProtP24666 [Medical]
GENETestsACP1
Disease Genetic AssociationACP1
Huge Navigator ACP1 [HugePedia]  ACP1 [HugeCancerGEM]
snp3D : Map Gene to Disease52
DGIdb (Drug Gene Interaction db)ACP1
General knowledge
Homologs : HomoloGeneACP1
Homology/Alignments : Family Browser (UCSC)ACP1
Phylogenetic Trees/Animal Genes : TreeFamACP1
Chemical/Protein Interactions : CTD52
Chemical/Pharm GKB GenePA24446
Clinical trialACP1
Cancer Resource (Charite)ENSG00000143727
Other databases
Probes
Litterature
PubMed111 Pubmed reference(s) in Entrez
CoreMineACP1
GoPubMedACP1
iHOPACP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 20 19:59:43 CET 2014

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