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ACP1 (acid phosphatase 1, soluble)

Identity

Other namesHAAP
HGNC (Hugo) ACP1
LocusID (NCBI) 52
Location 2p25.3
Location_base_pair Starts at 264869 and ends at 272481 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ACP1   122
Entrez_Gene (NCBI)ACP1  52  acid phosphatase 1, soluble
Cards
GeneCards (Weizmann)ACP1
Ensembl (Hinxton)ENSG00000143727 [Gene_View]  chr2:264869-272481 [Contig_View]  ACP1 [Vega]
AceView (NCBI)ACP1
Genatlas (Paris)ACP1
SOURCE (Stanford)NM_001040649 NM_004300 NM_007099 NM_177554
Genomic and cartography
GoldenPath (UCSC)ACP1  -  2p25.3   chr2:264869-272481 +  2p25.3   [Description]    (hg19-Feb_2009)
EnsemblACP1 - 2p25.3 [CytoView]
Mapping of homologs : NCBIACP1 [Mapview]
OMIM171500   
Gene and transcription
Genbank (Entrez)AB209838 AK289934 AK291861 BC007422 BC020699
RefSeq transcript (SRS)NM_001040649 NM_004300 NM_007099 NM_177554
RefSeq transcript (Entrez)NM_001040649 NM_004300 NM_007099 NM_177554
RefSeq genomic (SRS)AC_000134 NC_000002 NC_018913 NG_012035 NT_022221 NW_001838758 NW_004078002
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_012035 NT_022221 NW_001838758 NW_004078002
Consensus coding sequences : CCDS (NCBI)ACP1
Cluster EST : UnigeneHs.558296 [ SRS ] Hs.558296 [ NCBI ]
CGAP (NCI)Hs.558296
Alternative Splicing : Fast-db (Paris)GSHG0016207
Alternative Splicing GalleryENSG00000143727
Gene ExpressionACP1 [ NCBI-GEO ]   ACP1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP24666 (SRS) P24666 (Uniprot)
NextProtP24666
With graphics : InterProP24666
Splice isoforms : SwissVarP24666(Swissvar)
Domains : Interpro (SRS)Ptyr_pPase_SF    Tyr_Pase_low_mol_wt_mml    Tyr_phospatase/Ars_reductase    Tyr_phospatase_low_mol_wt   
Domains : Interpro (EBI)Ptyr_pPase_SF    Tyr_Pase_low_mol_wt_mml    Tyr_phospatase/Ars_reductase    Tyr_phospatase_low_mol_wt   
Related proteins : CluSTrP24666
Domain families : Pfam (SRS)LMWPc (PF01451)   
Domain families : Pfam (Sanger)LMWPc (PF01451)   
Domain families : Pfam (NCBI)pfam01451   
Domain families : Smart (EMBL)LMWPc (SM00226)  
DMDM52
Blocks (Seattle)P24666
PDB (SRS)1XWW    3N8I    5PNT   
PDB (PDBSum)1XWW    3N8I    5PNT   
PDB (IMB)1XWW    3N8I    5PNT   
PDB (RSDB)1XWW    3N8I    5PNT   
Human Protein AtlasENSG00000143727
HPRD08881
IPIIPI00219861   IPI00218847   IPI00410615   IPI00382703   IPI00759646   IPI00892543   IPI00893442   IPI00893203   
Protein Interaction databases
DIP (DOE-UCLA)P24666
IntAct (EBI)P24666
FunCoupENSG00000143727
REACTOMEACP1
Protein Interaction Database52
BioGRIDACP1
InParanoidP24666
Interologous Interaction database P24666
IntegromeDBACP1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ACP1
SNP (GeneSNP Utah)ACP1
SNP : HGBaseACP1
Genetic variants : HAPMAPACP1
Somatic Mutations in Cancer : COSMICACP1 
CONAN: Copy Number AnalysisACP1 
Mutations and Diseases : HGMDACP1
OMIM171500   
GENETests171500   
Disease Genetic AssociationACP1
Huge Navigator ACP1 [HugePedia]  ACP1 [HugeCancerGEM]
Genomic VariantsACP1  ACP1 [DGVbeta]
snp3D : Map Gene to Disease52
General knowledge
Homologs : HomoloGeneACP1
Homology/Alignments : Family Browser (UCSC)ACP1
Phylogenetic Trees/Animal Genes : TreeFamACP1
Catalytic activity : Enzyme3.1.3.48 [ Enzyme-Expasy ]   3.1.3.48 [ Enzyme-SRS ]   3.1.3.48 [ IntEnz-EBI ]   3.1.3.48 [ BRENDA ]   3.1.3.48 [ KEGG ]   
Chemical/Protein Interactions : CTD52
Chemical/Pharm GKB GenePA24446
Clinical trialACP1
Cancer Resource (Charite)ENSG00000143727
Ontology : AmiGOacid phosphatase activity  non-membrane spanning protein tyrosine phosphatase activity  protein binding  nucleus  cytoplasm  synaptic transmission  internal side of plasma membrane  SH3 domain binding  
Ontology : EGO-EBIacid phosphatase activity  non-membrane spanning protein tyrosine phosphatase activity  protein binding  nucleus  cytoplasm  synaptic transmission  internal side of plasma membrane  SH3 domain binding  
Pathways : KEGGRiboflavin metabolismgamma-Hexachlorocyclohexane degradationAdherens junction
Other databases
Probes
Litterature
PubMed98 Pubmed reference(s) in Entrez
PubGeneACP1
iHOPACP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:29:56 CEST 2013
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