Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ACPP (acid phosphatase, prostate)

Identity

Other names5'-NT
ACP-3
ACP3
PAP
HGNC (Hugo) ACPP
LocusID (NCBI) 55
Location 3q22.1
Location_base_pair Starts at 132036211 and ends at 132077690 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ACPP   125
Entrez_Gene (NCBI)ACPP  55  acid phosphatase, prostate
Cards
GeneCards (Weizmann)ACPP
Ensembl (Hinxton)ENSG00000014257 [Gene_View]  chr3:132036211-132077690 [Contig_View]  ACPP [Vega]
AceView (NCBI)ACPP
Genatlas (Paris)ACPP
SOURCE (Stanford)NM_001099 NM_001134194
Genomic and cartography
GoldenPath (UCSC)ACPP  -  3q22.1   chr3:132036211-132077690 +  3q22.1   [Description]    (hg19-Feb_2009)
EnsemblACPP - 3q22.1 [CytoView]
Mapping of homologs : NCBIACPP [Mapview]
OMIM171790   
Gene and transcription
Genbank (Entrez)AA578274 AB102888 AK300540 AW136372 BC007460
RefSeq transcript (SRS)NM_001099 NM_001134194
RefSeq transcript (Entrez)NM_001099 NM_001134194
RefSeq genomic (SRS)AC_000135 NC_000003 NC_018914 NT_005612 NW_001838884 NW_004078013
RefSeq genomic (Entrez)AC_000135 NC_000003 NC_018914 NT_005612 NW_001838884 NW_004078013
Consensus coding sequences : CCDS (NCBI)ACPP
Cluster EST : UnigeneHs.433060 [ SRS ] Hs.433060 [ NCBI ]
CGAP (NCI)Hs.433060
Alternative Splicing : Fast-db (Paris)GSHG0021160
Alternative Splicing GalleryENSG00000014257
Gene ExpressionACPP [ NCBI-GEO ]   ACPP [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP15309 (SRS) P15309 (Uniprot)
NextProtP15309
With graphics : InterProP15309
Splice isoforms : SwissVarP15309(Swissvar)
Domaine pattern : Prosite (SRS)HIS_ACID_PHOSPHAT_1 (PS00616)    HIS_ACID_PHOSPHAT_2 (PS00778)   
Domaine pattern : Prosite (Expaxy)HIS_ACID_PHOSPHAT_1 (PS00616)    HIS_ACID_PHOSPHAT_2 (PS00778)   
Domains : Interpro (SRS)His_Pase_superF_clade-2   
Domains : Interpro (EBI)His_Pase_superF_clade-2   
Related proteins : CluSTrP15309
Domain families : Pfam (SRS)His_Phos_2 (PF00328)   
Domain families : Pfam (Sanger)His_Phos_2 (PF00328)   
Domain families : Pfam (NCBI)pfam00328   
DMDM55
Blocks (Seattle)P15309
PDB (SRS)1CVI    1ND5    1ND6    2HPA    2L3H    2L77    2L79    3PPD   
PDB (PDBSum)1CVI    1ND5    1ND6    2HPA    2L3H    2L77    2L79    3PPD   
PDB (IMB)1CVI    1ND5    1ND6    2HPA    2L3H    2L77    2L79    3PPD   
PDB (RSDB)1CVI    1ND5    1ND6    2HPA    2L3H    2L77    2L79    3PPD   
Human Protein AtlasENSG00000014257
HPRD01378
IPIIPI00396434   IPI00289983   IPI00945650   IPI00946121   IPI00795534   
Protein Interaction databases
DIP (DOE-UCLA)P15309
IntAct (EBI)P15309
FunCoupENSG00000014257
REACTOMEACPP
Protein Interaction Database55
BioGRIDACPP
InParanoidP15309
Interologous Interaction database P15309
IntegromeDBACPP
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ACPP
SNP (GeneSNP Utah)ACPP
SNP : HGBaseACPP
Genetic variants : HAPMAPACPP
Somatic Mutations in Cancer : COSMICACPP 
CONAN: Copy Number AnalysisACPP 
Mutations and Diseases : HGMDACPP
OMIM171790   
GENETests171790   
Disease Genetic AssociationACPP
Huge Navigator ACPP [HugePedia]  ACPP [HugeCancerGEM]
Genomic VariantsACPP  ACPP [DGVbeta]
snp3D : Map Gene to Disease55
General knowledge
Homologs : HomoloGeneACPP
Homology/Alignments : Family Browser (UCSC)ACPP
Phylogenetic Trees/Animal Genes : TreeFamACPP
Catalytic activity : Enzyme3.1.3.2 [ Enzyme-Expasy ]   3.1.3.2 [ Enzyme-SRS ]   3.1.3.2 [ IntEnz-EBI ]   3.1.3.2 [ BRENDA ]   3.1.3.2 [ KEGG ]   
Chemical/Protein Interactions : CTD55
Chemical/Pharm GKB GenePA24449
Clinical trialACPP
Cancer Resource (Charite)ENSG00000014257
Ontology : AmiGOacid phosphatase activity  extracellular region  intracellular  lysosomal membrane  multivesicular body  plasma membrane  purine nucleobase metabolic process  5'-nucleotidase activity  nucleotide metabolic process  integral to membrane  secretory granule  filopodium  Golgi cisterna  choline binding  identical protein binding  apical part of cell  adenosine metabolic process  
Ontology : EGO-EBIacid phosphatase activity  extracellular region  intracellular  lysosomal membrane  multivesicular body  plasma membrane  purine nucleobase metabolic process  5'-nucleotidase activity  nucleotide metabolic process  integral to membrane  secretory granule  filopodium  Golgi cisterna  choline binding  identical protein binding  apical part of cell  adenosine metabolic process  
Pathways : KEGGgamma-Hexachlorocyclohexane degradationRiboflavin metabolism
Other databases
Probes
Litterature
PubMed70 Pubmed reference(s) in Entrez
PubGeneACPP
iHOPACPP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:31:40 CEST 2013
Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.