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ACRBP (acrosin binding protein)

Identity

Alias_symbol (synonym)SP32
OY-TES-1
CT23
Other alias
HGNC (Hugo) ACRBP
LocusID (NCBI) 84519
Atlas_Id 558
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 6638076 and ends at 6647414 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACRBP (12p13.31) / MLXIP (12q24.31)ENO2 (12p13.31) / ACRBP (12p13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Small Cell Carcinoma


External links

Nomenclature
HGNC (Hugo)ACRBP   17195
Cards
Entrez_Gene (NCBI)ACRBP  84519  acrosin binding protein
AliasesCT23; OY-TES-1; SP32
GeneCards (Weizmann)ACRBP
Ensembl hg19 (Hinxton)ENSG00000111644 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111644 [Gene_View]  chr12:6638076-6647414 [Contig_View]  ACRBP [Vega]
ICGC DataPortalENSG00000111644
TCGA cBioPortalACRBP
AceView (NCBI)ACRBP
Genatlas (Paris)ACRBP
WikiGenes84519
SOURCE (Princeton)ACRBP
Genetics Home Reference (NIH)ACRBP
Genomic and cartography
GoldenPath hg38 (UCSC)ACRBP  -     chr12:6638076-6647414 -  12p13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ACRBP  -     12p13.31   [Description]    (hg19-Feb_2009)
EnsemblACRBP - 12p13.31 [CytoView hg19]  ACRBP - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBIACRBP [Mapview hg19]  ACRBP [Mapview hg38]
OMIM608352   
Gene and transcription
Genbank (Entrez)AB051833 AF085884 AK302290 AK311572 AK312782
RefSeq transcript (Entrez)NM_032489
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ACRBP
Cluster EST : UnigeneHs.123239 [ NCBI ]
CGAP (NCI)Hs.123239
Alternative Splicing GalleryENSG00000111644
Gene ExpressionACRBP [ NCBI-GEO ]   ACRBP [ EBI - ARRAY_EXPRESS ]   ACRBP [ SEEK ]   ACRBP [ MEM ]
Gene Expression Viewer (FireBrowse)ACRBP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84519
GTEX Portal (Tissue expression)ACRBP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NEB7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NEB7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NEB7
Splice isoforms : SwissVarQ8NEB7
PhosPhoSitePlusQ8NEB7
Domains : Interpro (EBI)Kazal_dom    Proacrosin-bd   
Domain families : Pfam (Sanger)PBP_sp32 (PF07222)   
Domain families : Pfam (NCBI)pfam07222   
Conserved Domain (NCBI)ACRBP
DMDM Disease mutations84519
Blocks (Seattle)ACRBP
SuperfamilyQ8NEB7
Human Protein AtlasENSG00000111644
Peptide AtlasQ8NEB7
HPRD16322
IPIIPI00168645   IPI00791667   IPI01013291   IPI01011017   IPI01012381   
Protein Interaction databases
DIP (DOE-UCLA)Q8NEB7
IntAct (EBI)Q8NEB7
FunCoupENSG00000111644
BioGRIDACRBP
STRING (EMBL)ACRBP
ZODIACACRBP
Ontologies - Pathways
QuickGOQ8NEB7
Ontology : AmiGOacrosomal vesicle  acrosomal vesicle  acrosomal membrane  molecular_function  extracellular region  nucleus  biological_process  sperm capacitation  
Ontology : EGO-EBIacrosomal vesicle  acrosomal vesicle  acrosomal membrane  molecular_function  extracellular region  nucleus  biological_process  sperm capacitation  
NDEx NetworkACRBP
Atlas of Cancer Signalling NetworkACRBP
Wikipedia pathwaysACRBP
Orthology - Evolution
OrthoDB84519
GeneTree (enSembl)ENSG00000111644
Phylogenetic Trees/Animal Genes : TreeFamACRBP
HOVERGENQ8NEB7
HOGENOMQ8NEB7
Homologs : HomoloGeneACRBP
Homology/Alignments : Family Browser (UCSC)ACRBP
Gene fusions - Rearrangements
Fusion : MitelmanENO2/ACRBP [12p13.31/12p13.31]  [t(12;12)(p13;p13)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerACRBP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACRBP
dbVarACRBP
ClinVarACRBP
1000_GenomesACRBP 
Exome Variant ServerACRBP
ExAC (Exome Aggregation Consortium)ACRBP (select the gene name)
Genetic variants : HAPMAP84519
Genomic Variants (DGV)ACRBP [DGVbeta]
DECIPHERACRBP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisACRBP 
Mutations
ICGC Data PortalACRBP 
TCGA Data PortalACRBP 
Broad Tumor PortalACRBP
OASIS PortalACRBP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICACRBP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDACRBP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ACRBP
DgiDB (Drug Gene Interaction Database)ACRBP
DoCM (Curated mutations)ACRBP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ACRBP (select a term)
intoGenACRBP
Cancer3DACRBP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608352   
Orphanet
MedgenACRBP
Genetic Testing Registry ACRBP
NextProtQ8NEB7 [Medical]
TSGene84519
GENETestsACRBP
Target ValidationACRBP
Huge Navigator ACRBP [HugePedia]
snp3D : Map Gene to Disease84519
BioCentury BCIQACRBP
ClinGenACRBP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84519
Chemical/Pharm GKB GenePA24452
Clinical trialACRBP
Miscellaneous
canSAR (ICR)ACRBP (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineACRBP
EVEXACRBP
GoPubMedACRBP
iHOPACRBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:22:33 CEST 2017

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