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ACRC (acidic repeat containing)

Identity

Other aliasNAAR1
HGNC (Hugo) ACRC
LocusID (NCBI) 93953
Atlas_Id 60098
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 70797874 and ends at 70833433 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ACRC   15805
Cards
Entrez_Gene (NCBI)ACRC  93953  acidic repeat containing
AliasesNAAR1
GeneCards (Weizmann)ACRC
Ensembl hg19 (Hinxton)ENSG00000147174 [Gene_View]  chrX:70797874-70833433 [Contig_View]  ACRC [Vega]
Ensembl hg38 (Hinxton)ENSG00000147174 [Gene_View]  chrX:70797874-70833433 [Contig_View]  ACRC [Vega]
ICGC DataPortalENSG00000147174
TCGA cBioPortalACRC
AceView (NCBI)ACRC
Genatlas (Paris)ACRC
WikiGenes93953
SOURCE (Princeton)ACRC
Genetics Home Reference (NIH)ACRC
Genomic and cartography
GoldenPath hg19 (UCSC)ACRC  -     chrX:70797874-70833433 +  Xq13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ACRC  -     Xq13.1   [Description]    (hg38-Dec_2013)
EnsemblACRC - Xq13.1 [CytoView hg19]  ACRC - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBIACRC [Mapview hg19]  ACRC [Mapview hg38]
OMIM300369   
Gene and transcription
Genbank (Entrez)AJ311392 AK097433 AK127607 BC136259 DB073623
RefSeq transcript (Entrez)NM_052957
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011651 NW_004929443
Consensus coding sequences : CCDS (NCBI)ACRC
Cluster EST : UnigeneHs.135167 [ NCBI ]
CGAP (NCI)Hs.135167
Alternative Splicing GalleryENSG00000147174
Gene ExpressionACRC [ NCBI-GEO ]   ACRC [ EBI - ARRAY_EXPRESS ]   ACRC [ SEEK ]   ACRC [ MEM ]
Gene Expression Viewer (FireBrowse)ACRC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)93953
GTEX Portal (Tissue expression)ACRC
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96QF7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96QF7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96QF7
Splice isoforms : SwissVarQ96QF7
PhosPhoSitePlusQ96QF7
Domains : Interpro (EBI)SprT-like_domain   
Domain families : Pfam (Sanger)SprT-like (PF10263)   
Domain families : Pfam (NCBI)pfam10263   
Domain families : Smart (EMBL)SprT (SM00731)  
Conserved Domain (NCBI)ACRC
DMDM Disease mutations93953
Blocks (Seattle)ACRC
SuperfamilyQ96QF7
Human Protein AtlasENSG00000147174
Peptide AtlasQ96QF7
HPRD02298
IPIIPI00289929   
Protein Interaction databases
DIP (DOE-UCLA)Q96QF7
IntAct (EBI)Q96QF7
FunCoupENSG00000147174
BioGRIDACRC
STRING (EMBL)ACRC
ZODIACACRC
Ontologies - Pathways
QuickGOQ96QF7
Ontology : AmiGOnucleus  
Ontology : EGO-EBInucleus  
NDEx NetworkACRC
Atlas of Cancer Signalling NetworkACRC
Wikipedia pathwaysACRC
Orthology - Evolution
OrthoDB93953
GeneTree (enSembl)ENSG00000147174
Phylogenetic Trees/Animal Genes : TreeFamACRC
HOVERGENQ96QF7
HOGENOMQ96QF7
Homologs : HomoloGeneACRC
Homology/Alignments : Family Browser (UCSC)ACRC
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerACRC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACRC
dbVarACRC
ClinVarACRC
1000_GenomesACRC 
Exome Variant ServerACRC
ExAC (Exome Aggregation Consortium)ACRC (select the gene name)
Genetic variants : HAPMAP93953
Genomic Variants (DGV)ACRC [DGVbeta]
DECIPHER (Syndromes)X:70797874-70833433  ENSG00000147174
CONAN: Copy Number AnalysisACRC 
Mutations
ICGC Data PortalACRC 
TCGA Data PortalACRC 
Broad Tumor PortalACRC
OASIS PortalACRC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICACRC  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDACRC
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ACRC
DgiDB (Drug Gene Interaction Database)ACRC
DoCM (Curated mutations)ACRC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ACRC (select a term)
intoGenACRC
Cancer3DACRC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300369   
Orphanet
MedgenACRC
Genetic Testing Registry ACRC
NextProtQ96QF7 [Medical]
TSGene93953
GENETestsACRC
Huge Navigator ACRC [HugePedia]
snp3D : Map Gene to Disease93953
BioCentury BCIQACRC
ClinGenACRC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD93953
Chemical/Pharm GKB GenePA24453
Clinical trialACRC
Miscellaneous
canSAR (ICR)ACRC (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineACRC
EVEXACRC
GoPubMedACRC
iHOPACRC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:53:31 CET 2017

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