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ACRV1 (acrosomal vesicle protein 1)

Identity

Alias_symbol (synonym)SPACA2
SP-10
D11S4365
Other alias
HGNC (Hugo) ACRV1
LocusID (NCBI) 56
Atlas_Id 60099
Location 11q24.2  [Link to chromosome band 11q24]
Location_base_pair Starts at 125542229 and ends at 125550793 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ACRV1   127
Cards
Entrez_Gene (NCBI)ACRV1  56  acrosomal vesicle protein 1
AliasesD11S4365; SP-10; SPACA2
GeneCards (Weizmann)ACRV1
Ensembl hg19 (Hinxton)ENSG00000134940 [Gene_View]  chr11:125542229-125550793 [Contig_View]  ACRV1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000134940 [Gene_View]  chr11:125542229-125550793 [Contig_View]  ACRV1 [Vega]
ICGC DataPortalENSG00000134940
TCGA cBioPortalACRV1
AceView (NCBI)ACRV1
Genatlas (Paris)ACRV1
WikiGenes56
SOURCE (Princeton)ACRV1
Genetics Home Reference (NIH)ACRV1
Genomic and cartography
GoldenPath hg19 (UCSC)ACRV1  -     chr11:125542229-125550793 -  11q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ACRV1  -     11q24.2   [Description]    (hg38-Dec_2013)
EnsemblACRV1 - 11q24.2 [CytoView hg19]  ACRV1 - 11q24.2 [CytoView hg38]
Mapping of homologs : NCBIACRV1 [Mapview hg19]  ACRV1 [Mapview hg38]
OMIM102525   
Gene and transcription
Genbank (Entrez)AB451476 AK223335 BC014588 BG720361 BI826178
RefSeq transcript (Entrez)NM_001612 NM_020069 NM_020107 NM_020108 NM_020109 NM_020110 NM_020111 NM_020112 NM_020113 NM_020114 NM_020115
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)ACRV1
Cluster EST : UnigeneHs.596575 [ NCBI ]
CGAP (NCI)Hs.596575
Alternative Splicing GalleryENSG00000134940
Gene ExpressionACRV1 [ NCBI-GEO ]   ACRV1 [ EBI - ARRAY_EXPRESS ]   ACRV1 [ SEEK ]   ACRV1 [ MEM ]
Gene Expression Viewer (FireBrowse)ACRV1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56
GTEX Portal (Tissue expression)ACRV1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP26436   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP26436  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP26436
Splice isoforms : SwissVarP26436
PhosPhoSitePlusP26436
Domains : Interpro (EBI)Acrosomal_SP-10   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ACRV1
DMDM Disease mutations56
Blocks (Seattle)ACRV1
SuperfamilyP26436
Human Protein AtlasENSG00000134940
Peptide AtlasP26436
HPRD00014
IPIIPI00032270   IPI00219630   IPI00219631   IPI00218531   IPI00218532   IPI00218533   IPI00218534   IPI00218535   IPI00333174   IPI00218537   IPI00218538   
Protein Interaction databases
DIP (DOE-UCLA)P26436
IntAct (EBI)P26436
FunCoupENSG00000134940
BioGRIDACRV1
STRING (EMBL)ACRV1
ZODIACACRV1
Ontologies - Pathways
QuickGOP26436
Ontology : AmiGOacrosomal vesicle  multicellular organismal development  
Ontology : EGO-EBIacrosomal vesicle  multicellular organismal development  
NDEx NetworkACRV1
Atlas of Cancer Signalling NetworkACRV1
Wikipedia pathwaysACRV1
Orthology - Evolution
OrthoDB56
GeneTree (enSembl)ENSG00000134940
Phylogenetic Trees/Animal Genes : TreeFamACRV1
HOVERGENP26436
HOGENOMP26436
Homologs : HomoloGeneACRV1
Homology/Alignments : Family Browser (UCSC)ACRV1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerACRV1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACRV1
dbVarACRV1
ClinVarACRV1
1000_GenomesACRV1 
Exome Variant ServerACRV1
ExAC (Exome Aggregation Consortium)ACRV1 (select the gene name)
Genetic variants : HAPMAP56
Genomic Variants (DGV)ACRV1 [DGVbeta]
DECIPHER (Syndromes)11:125542229-125550793  ENSG00000134940
CONAN: Copy Number AnalysisACRV1 
Mutations
ICGC Data PortalACRV1 
TCGA Data PortalACRV1 
Broad Tumor PortalACRV1
OASIS PortalACRV1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICACRV1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDACRV1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ACRV1
DgiDB (Drug Gene Interaction Database)ACRV1
DoCM (Curated mutations)ACRV1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ACRV1 (select a term)
intoGenACRV1
Cancer3DACRV1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM102525   
Orphanet
MedgenACRV1
Genetic Testing Registry ACRV1
NextProtP26436 [Medical]
TSGene56
GENETestsACRV1
Huge Navigator ACRV1 [HugePedia]
snp3D : Map Gene to Disease56
BioCentury BCIQACRV1
ClinGenACRV1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56
Chemical/Pharm GKB GenePA24454
Clinical trialACRV1
Miscellaneous
canSAR (ICR)ACRV1 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineACRV1
EVEXACRV1
GoPubMedACRV1
iHOPACRV1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:53:31 CET 2017

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