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ACSS1 (acyl-CoA synthetase short chain family member 1)

Identity

Alias (NCBI)ACAS2L
ACECS1
AceCS2L
HGNC (Hugo) ACSS1
HGNC Alias symbdJ568C11.3
AceCS2L
MGC33843
HGNC Previous nameACAS2L
HGNC Previous nameacetyl-Coenzyme A synthetase 2 (AMP forming)-like
LocusID (NCBI) 84532
Atlas_Id 56946
Location 20p11.21  [Link to chromosome band 20p11]
Location_base_pair Starts at 25006237 and ends at 25058139 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ACSS1 (20p11.21) / APMAP (20p11.21)ACSS1 (20p11.21) / PHACTR3 (20q13.32)ACSS1 (20p11.21) / SPTLC1 (9q22.31)
ACSS1 (20p11.21) / ZNF131 (5p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ACSS1   16091
Cards
Entrez_Gene (NCBI)ACSS1    acyl-CoA synthetase short chain family member 1
AliasesACAS2L; ACECS1; AceCS2L
GeneCards (Weizmann)ACSS1
Ensembl hg19 (Hinxton)ENSG00000154930 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000154930 [Gene_View]  ENSG00000154930 [Sequence]  chr20:25006237-25058139 [Contig_View]  ACSS1 [Vega]
ICGC DataPortalENSG00000154930
TCGA cBioPortalACSS1
AceView (NCBI)ACSS1
Genatlas (Paris)ACSS1
SOURCE (Princeton)ACSS1
Genetics Home Reference (NIH)ACSS1
Genomic and cartography
GoldenPath hg38 (UCSC)ACSS1  -     chr20:25006237-25058139 -  20p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ACSS1  -     20p11.21   [Description]    (hg19-Feb_2009)
GoldenPathACSS1 - 20p11.21 [CytoView hg19]  ACSS1 - 20p11.21 [CytoView hg38]
ImmunoBaseENSG00000154930
Genome Data Viewer NCBIACSS1 [Mapview hg19]  
OMIM614355   
Gene and transcription
Genbank (Entrez)AB058749 AK024396 AK024424 AK027817 AK090851
RefSeq transcript (Entrez)NM_001252675 NM_001252676 NM_001252677 NM_032501
Consensus coding sequences : CCDS (NCBI)ACSS1
Gene ExpressionACSS1 [ NCBI-GEO ]   ACSS1 [ EBI - ARRAY_EXPRESS ]   ACSS1 [ SEEK ]   ACSS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ACSS1 [ Firebrowse - Broad ]
GenevisibleExpression of ACSS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84532
GTEX Portal (Tissue expression)ACSS1
Human Protein AtlasENSG00000154930-ACSS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ACSS1
Human Protein Atlas [tissue]ENSG00000154930-ACSS1 [tissue]
Protein Interaction databases
BioGRIDACSS1
STRING (EMBL)ACSS1
ZODIACACSS1
Ontologies - Pathways
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXACSS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 14:58:17 CEST 2021

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