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ACTL7B (actin like 7B)

Identity

Alias (NCBI)Tact1
HGNC (Hugo) ACTL7B
HGNC Alias symbTact1
LocusID (NCBI) 10880
Atlas_Id 60116
Location 9q31.3  [Link to chromosome band 9q31]
Location_base_pair Starts at 108854589 and ends at 108855986 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ACTL7B   162
Cards
Entrez_Gene (NCBI)ACTL7B    actin like 7B
AliasesTact1
GeneCards (Weizmann)ACTL7B
Ensembl hg19 (Hinxton)ENSG00000148156 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148156 [Gene_View]  ENSG00000148156 [Sequence]  chr9:108854589-108855986 [Contig_View]  ACTL7B [Vega]
ICGC DataPortalENSG00000148156
TCGA cBioPortalACTL7B
AceView (NCBI)ACTL7B
Genatlas (Paris)ACTL7B
SOURCE (Princeton)ACTL7B
Genetics Home Reference (NIH)ACTL7B
Genomic and cartography
GoldenPath hg38 (UCSC)ACTL7B  -     chr9:108854589-108855986 -  9q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ACTL7B  -     9q31.3   [Description]    (hg19-Feb_2009)
GoldenPathACTL7B - 9q31.3 [CytoView hg19]  ACTL7B - 9q31.3 [CytoView hg38]
ImmunoBaseENSG00000148156
Genome Data Viewer NCBIACTL7B [Mapview hg19]  
OMIM604304   
Gene and transcription
Genbank (Entrez)AI150021 AK097670 AK313871 BC033789 DB021848
RefSeq transcript (Entrez)NM_006686
Consensus coding sequences : CCDS (NCBI)ACTL7B
Gene ExpressionACTL7B [ NCBI-GEO ]   ACTL7B [ EBI - ARRAY_EXPRESS ]   ACTL7B [ SEEK ]   ACTL7B [ MEM ]
Gene Expression Viewer (FireBrowse)ACTL7B [ Firebrowse - Broad ]
GenevisibleExpression of ACTL7B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10880
GTEX Portal (Tissue expression)ACTL7B
Human Protein AtlasENSG00000148156-ACTL7B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y614   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y614  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y614
PhosPhoSitePlusQ9Y614
Domains : Interpro (EBI)Actin    ACTL7B    ATPase_NBD   
Domain families : Pfam (Sanger)Actin (PF00022)   
Domain families : Pfam (NCBI)pfam00022   
Domain families : Smart (EMBL)ACTIN (SM00268)  
Conserved Domain (NCBI)ACTL7B
SuperfamilyQ9Y614
AlphaFold pdb e-kbQ9Y614   
Human Protein Atlas [tissue]ENSG00000148156-ACTL7B [tissue]
HPRD11977
Protein Interaction databases
DIP (DOE-UCLA)Q9Y614
IntAct (EBI)Q9Y614
BioGRIDACTL7B
STRING (EMBL)ACTL7B
ZODIACACTL7B
Ontologies - Pathways
QuickGOQ9Y614
Ontology : AmiGOstructural constituent of cytoskeleton  protein binding  nucleus  cytoplasm  dynactin complex  cytoskeleton organization  actin cytoskeleton  
Ontology : EGO-EBIstructural constituent of cytoskeleton  protein binding  nucleus  cytoplasm  dynactin complex  cytoskeleton organization  actin cytoskeleton  
NDEx NetworkACTL7B
Atlas of Cancer Signalling NetworkACTL7B
Wikipedia pathwaysACTL7B
Orthology - Evolution
OrthoDB10880
GeneTree (enSembl)ENSG00000148156
Phylogenetic Trees/Animal Genes : TreeFamACTL7B
Homologs : HomoloGeneACTL7B
Homology/Alignments : Family Browser (UCSC)ACTL7B
Gene fusions - Rearrangements
Fusion : QuiverACTL7B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerACTL7B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ACTL7B
dbVarACTL7B
ClinVarACTL7B
MonarchACTL7B
1000_GenomesACTL7B 
Exome Variant ServerACTL7B
GNOMAD BrowserENSG00000148156
Varsome BrowserACTL7B
ACMGACTL7B variants
VarityQ9Y614
Genomic Variants (DGV)ACTL7B [DGVbeta]
DECIPHERACTL7B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisACTL7B 
Mutations
ICGC Data PortalACTL7B 
TCGA Data PortalACTL7B 
Broad Tumor PortalACTL7B
OASIS PortalACTL7B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICACTL7B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DACTL7B
Mutations and Diseases : HGMDACTL7B
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaACTL7B
DgiDB (Drug Gene Interaction Database)ACTL7B
DoCM (Curated mutations)ACTL7B
CIViC (Clinical Interpretations of Variants in Cancer)ACTL7B
Cancer3DACTL7B
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604304   
Orphanet
DisGeNETACTL7B
MedgenACTL7B
Genetic Testing Registry ACTL7B
NextProtQ9Y614 [Medical]
GENETestsACTL7B
Target ValidationACTL7B
Huge Navigator ACTL7B [HugePedia]
ClinGenACTL7B
Clinical trials, drugs, therapy
MyCancerGenomeACTL7B
Protein Interactions : CTDACTL7B
Pharm GKB GenePA24484
PharosQ9Y614
Clinical trialACTL7B
Miscellaneous
canSAR (ICR)ACTL7B
HarmonizomeACTL7B
DataMed IndexACTL7B
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXACTL7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:41:27 CEST 2021

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