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ACVR1 (activin A receptor, type I)

Identity

Other namesACTRI
ACVR1A
ACVRLK2
ALK2
FOP
SKR1
TSRI
HGNC (Hugo) ACVR1
LocusID (NCBI) 90
Location 2q24.1
Location_base_pair Starts at 158592958 and ends at 158731623 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ACVR1   171
Entrez_Gene (NCBI)ACVR1  90  activin A receptor, type I
Cards
GeneCards (Weizmann)ACVR1
Ensembl (Hinxton)ENSG00000115170 [Gene_View]  chr2:158592958-158731623 [Contig_View]  ACVR1 [Vega]
AceView (NCBI)ACVR1
Genatlas (Paris)ACVR1
SOURCE (Stanford)NM_001105 NM_001111067
Genomic and cartography
GoldenPath (UCSC)ACVR1  -  2q24.1   chr2:158592958-158731623 -  2q24.1   [Description]    (hg19-Feb_2009)
EnsemblACVR1 - 2q24.1 [CytoView]
Mapping of homologs : NCBIACVR1 [Mapview]
OMIM102576   135100   
Gene and transcription
Genbank (Entrez)AK297765 AK313630 BC033867 BC036748 DA796090
RefSeq transcript (SRS)NM_001105 NM_001111067
RefSeq transcript (Entrez)NM_001105 NM_001111067
RefSeq genomic (SRS)AC_000134 NC_000002 NC_018913 NG_008004 NT_005403 NW_001838860 NW_004078008
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_008004 NT_005403 NW_001838860 NW_004078008
Consensus coding sequences : CCDS (NCBI)ACVR1
Cluster EST : UnigeneHs.470316 [ SRS ] Hs.470316 [ NCBI ]
CGAP (NCI)Hs.470316
Alternative Splicing : Fast-db (Paris)GSHG0018085
Alternative Splicing GalleryENSG00000115170
Gene ExpressionACVR1 [ NCBI-GEO ]   ACVR1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ04771 (SRS) Q04771 (Uniprot)
NextProtQ04771
With graphics : InterProQ04771
Splice isoforms : SwissVarQ04771(Swissvar)
Domaine pattern : Prosite (SRS)GS (PS51256)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domaine pattern : Prosite (Expaxy)GS (PS51256)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (SRS)Activin_II/TGFBeta-II_recpt    Activin_rcpt    Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS    TGF_beta_rcpt_GS   
Domains : Interpro (EBI)Activin_II/TGFBeta-II_recpt    Activin_rcpt    Kinase-like_dom    Prot_kinase_cat_dom    Protein_kinase_ATP_BS    Ser/Thr_kinase_AS    TGF_beta_rcpt_GS   
Related proteins : CluSTrQ04771
Domain families : Pfam (SRS)Activin_recp (PF01064)    Pkinase (PF00069)    TGF_beta_GS (PF08515)   
Domain families : Pfam (Sanger)Activin_recp (PF01064)    Pkinase (PF00069)    TGF_beta_GS (PF08515)   
Domain families : Pfam (NCBI)pfam01064    pfam00069    pfam08515   
Domain families : Smart (EMBL)GS (SM00467)  
DMDM90
Blocks (Seattle)Q04771
PDB (SRS)3H9R    3MTF    3OOM    3Q4U    4DYM   
PDB (PDBSum)3H9R    3MTF    3OOM    3Q4U    4DYM   
PDB (IMB)3H9R    3MTF    3OOM    3Q4U    4DYM   
PDB (RSDB)3H9R    3MTF    3OOM    3Q4U    4DYM   
Human Protein AtlasENSG00000115170
HPRD00021
IPIIPI00029219   IPI01011207   IPI00917815   IPI00917175   IPI00917000   
Protein Interaction databases
DIP (DOE-UCLA)Q04771
IntAct (EBI)Q04771
FunCoupENSG00000115170
REACTOMEACVR1
Protein Interaction Database90
BioGRIDACVR1
InParanoidQ04771
Interologous Interaction database Q04771
IntegromeDBACVR1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ACVR1
SNP (GeneSNP Utah)ACVR1
SNP : HGBaseACVR1
Genetic variants : HAPMAPACVR1
Somatic Mutations in Cancer : COSMICACVR1 
CONAN: Copy Number AnalysisACVR1 
Mutations and Diseases : HGMDACVR1
OMIM102576    135100   
GENETests102576    135100   
Disease Genetic AssociationACVR1
Huge Navigator ACVR1 [HugePedia]  ACVR1 [HugeCancerGEM]
Genomic VariantsACVR1  ACVR1 [DGVbeta]
snp3D : Map Gene to Disease90
General knowledge
Homologs : HomoloGeneACVR1
Homology/Alignments : Family Browser (UCSC)ACVR1
Phylogenetic Trees/Animal Genes : TreeFamACVR1
Catalytic activity : Enzyme2.7.11.30 [ Enzyme-Expasy ]   2.7.11.30 [ Enzyme-SRS ]   2.7.11.30 [ IntEnz-EBI ]   2.7.11.30 [ BRENDA ]   2.7.11.30 [ KEGG ]   
Chemical/Protein Interactions : CTD90
Chemical/Pharm GKB GenePA24492
Clinical trialACVR1
Cancer Resource (Charite)ENSG00000115170
Ontology : AmiGOG1/S transition of mitotic cell cycle  patterning of blood vessels  urogenital system development  in utero embryonic development  gastrulation with mouth forming second  mesoderm formation  neural crest cell migration  acute inflammatory response  embryonic heart tube morphogenesis  mitral valve morphogenesis  atrial septum primum morphogenesis  protein kinase activity  protein serine/threonine kinase activity  transmembrane receptor protein serine/threonine kinase activity  receptor signaling protein serine/threonine kinase activity  transforming growth factor beta receptor activity, type I  protein binding  ATP binding  integral to plasma membrane  protein phosphorylation  transforming growth factor beta receptor signaling pathway  germ cell development  determination of left/right symmetry  negative regulation of signal transduction  positive regulation of pathway-restricted SMAD protein phosphorylation  activin receptor activity, type I  peptide hormone binding  peptidyl-threonine phosphorylation  regulation of ossification  positive regulation of bone mineralization  BMP signaling pathway  activin receptor signaling pathway  negative regulation of activin receptor signaling pathway  protein homodimerization activity  negative regulation of apoptotic process  apical part of cell  positive regulation of osteoblast differentiation  positive regulation of transcription, DNA-dependent  positive regulation of transcription from RNA polymerase II promoter  SMAD binding  metal ion binding  activin receptor complex  activin binding  regulation of skeletal muscle tissue development  transforming growth factor beta binding  smooth muscle cell differentiation  pharyngeal system development  pathway-restricted SMAD protein phosphorylation  cardiac muscle cell fate commitment  endocardial cushion cell fate commitment  cellular response to glucocorticoid stimulus  positive regulation of determination of dorsal identity  
Ontology : EGO-EBIG1/S transition of mitotic cell cycle  patterning of blood vessels  urogenital system development  in utero embryonic development  gastrulation with mouth forming second  mesoderm formation  neural crest cell migration  acute inflammatory response  embryonic heart tube morphogenesis  mitral valve morphogenesis  atrial septum primum morphogenesis  protein kinase activity  protein serine/threonine kinase activity  transmembrane receptor protein serine/threonine kinase activity  receptor signaling protein serine/threonine kinase activity  transforming growth factor beta receptor activity, type I  protein binding  ATP binding  integral to plasma membrane  protein phosphorylation  transforming growth factor beta receptor signaling pathway  germ cell development  determination of left/right symmetry  negative regulation of signal transduction  positive regulation of pathway-restricted SMAD protein phosphorylation  activin receptor activity, type I  peptide hormone binding  peptidyl-threonine phosphorylation  regulation of ossification  positive regulation of bone mineralization  BMP signaling pathway  activin receptor signaling pathway  negative regulation of activin receptor signaling pathway  protein homodimerization activity  negative regulation of apoptotic process  apical part of cell  positive regulation of osteoblast differentiation  positive regulation of transcription, DNA-dependent  positive regulation of transcription from RNA polymerase II promoter  SMAD binding  metal ion binding  activin receptor complex  activin binding  regulation of skeletal muscle tissue development  transforming growth factor beta binding  smooth muscle cell differentiation  pharyngeal system development  pathway-restricted SMAD protein phosphorylation  cardiac muscle cell fate commitment  endocardial cushion cell fate commitment  cellular response to glucocorticoid stimulus  positive regulation of determination of dorsal identity  
Pathways : BIOCARTAALK in cardiac myocytes [Genes]   
Pathways : KEGGTGF-beta signaling pathwayCytokine-cytokine receptor interaction
Other databases
Probes
Litterature
PubMed81 Pubmed reference(s) in Entrez
PubGeneACVR1
iHOPACVR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:22:55 CEST 2013

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