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ADAD2 (adenosine deaminase domain containing 2)

Identity

Alias_symbol (synonym)TENRL
FLJ00337
Other alias
HGNC (Hugo) ADAD2
LocusID (NCBI) 161931
Atlas_Id 60131
Location 16q24.1  [Link to chromosome band 16q24]
Location_base_pair Starts at 84191117 and ends at 84197166 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADAD2   30714
Cards
Entrez_Gene (NCBI)ADAD2  161931  adenosine deaminase domain containing 2
AliasesTENRL
GeneCards (Weizmann)ADAD2
Ensembl hg19 (Hinxton)ENSG00000140955 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140955 [Gene_View]  chr16:84191117-84197166 [Contig_View]  ADAD2 [Vega]
ICGC DataPortalENSG00000140955
TCGA cBioPortalADAD2
AceView (NCBI)ADAD2
Genatlas (Paris)ADAD2
WikiGenes161931
SOURCE (Princeton)ADAD2
Genetics Home Reference (NIH)ADAD2
Genomic and cartography
GoldenPath hg38 (UCSC)ADAD2  -     chr16:84191117-84197166 +  16q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADAD2  -     16q24.1   [Description]    (hg19-Feb_2009)
EnsemblADAD2 - 16q24.1 [CytoView hg19]  ADAD2 - 16q24.1 [CytoView hg38]
Mapping of homologs : NCBIADAD2 [Mapview hg19]  ADAD2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF447586 AK093046 AK093523 AK131102 AK315171
RefSeq transcript (Entrez)NM_001145400 NM_139174
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADAD2
Cluster EST : UnigeneHs.8977 [ NCBI ]
CGAP (NCI)Hs.8977
Alternative Splicing GalleryENSG00000140955
Gene ExpressionADAD2 [ NCBI-GEO ]   ADAD2 [ EBI - ARRAY_EXPRESS ]   ADAD2 [ SEEK ]   ADAD2 [ MEM ]
Gene Expression Viewer (FireBrowse)ADAD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)161931
GTEX Portal (Tissue expression)ADAD2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCV1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCV1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCV1
Splice isoforms : SwissVarQ8NCV1
PhosPhoSitePlusQ8NCV1
Domaine pattern : Prosite (Expaxy)A_DEAMIN_EDITASE (PS50141)    DS_RBD (PS50137)   
Domains : Interpro (EBI)A_deamin    dsRBD_dom   
Domain families : Pfam (Sanger)A_deamin (PF02137)    dsrm (PF00035)   
Domain families : Pfam (NCBI)pfam02137    pfam00035   
Domain families : Smart (EMBL)ADEAMc (SM00552)  
Conserved Domain (NCBI)ADAD2
DMDM Disease mutations161931
Blocks (Seattle)ADAD2
SuperfamilyQ8NCV1
Human Protein AtlasENSG00000140955
Peptide AtlasQ8NCV1
HPRD14107
IPIIPI00168466   IPI00300468   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCV1
IntAct (EBI)Q8NCV1
FunCoupENSG00000140955
BioGRIDADAD2
STRING (EMBL)ADAD2
ZODIACADAD2
Ontologies - Pathways
QuickGOQ8NCV1
Ontology : AmiGORNA binding  adenosine deaminase activity  RNA processing  
Ontology : EGO-EBIRNA binding  adenosine deaminase activity  RNA processing  
NDEx NetworkADAD2
Atlas of Cancer Signalling NetworkADAD2
Wikipedia pathwaysADAD2
Orthology - Evolution
OrthoDB161931
GeneTree (enSembl)ENSG00000140955
Phylogenetic Trees/Animal Genes : TreeFamADAD2
HOVERGENQ8NCV1
HOGENOMQ8NCV1
Homologs : HomoloGeneADAD2
Homology/Alignments : Family Browser (UCSC)ADAD2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADAD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADAD2
dbVarADAD2
ClinVarADAD2
1000_GenomesADAD2 
Exome Variant ServerADAD2
ExAC (Exome Aggregation Consortium)ADAD2 (select the gene name)
Genetic variants : HAPMAP161931
Genomic Variants (DGV)ADAD2 [DGVbeta]
DECIPHERADAD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADAD2 
Mutations
ICGC Data PortalADAD2 
TCGA Data PortalADAD2 
Broad Tumor PortalADAD2
OASIS PortalADAD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADAD2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADAD2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ADAD2
DgiDB (Drug Gene Interaction Database)ADAD2
DoCM (Curated mutations)ADAD2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADAD2 (select a term)
intoGenADAD2
Cancer3DADAD2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenADAD2
Genetic Testing Registry ADAD2
NextProtQ8NCV1 [Medical]
TSGene161931
GENETestsADAD2
Huge Navigator ADAD2 [HugePedia]
snp3D : Map Gene to Disease161931
BioCentury BCIQADAD2
ClinGenADAD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD161931
Chemical/Pharm GKB GenePA162375591
Clinical trialADAD2
Miscellaneous
canSAR (ICR)ADAD2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADAD2
EVEXADAD2
GoPubMedADAD2
iHOPADAD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 10:59:18 CEST 2017

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