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ADAM33 (ADAM metallopeptidase domain 33)

Identity

Alias_namesC20orf153
a disintegrin and metalloproteinase domain 33
chromosome 20 open reading frame 153
Alias_symbol (synonym)DKFZp434K0521
dJ964F7.1
Other aliasDJ964F7.1
HGNC (Hugo) ADAM33
LocusID (NCBI) 80332
Atlas_Id 46871
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 3667965 and ends at 3682690 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADAM33   15478
Cards
Entrez_Gene (NCBI)ADAM33  80332  ADAM metallopeptidase domain 33
AliasesC20orf153; DJ964F7.1
GeneCards (Weizmann)ADAM33
Ensembl hg19 (Hinxton)ENSG00000149451 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000149451 [Gene_View]  chr20:3667965-3682690 [Contig_View]  ADAM33 [Vega]
ICGC DataPortalENSG00000149451
TCGA cBioPortalADAM33
AceView (NCBI)ADAM33
Genatlas (Paris)ADAM33
WikiGenes80332
SOURCE (Princeton)ADAM33
Genetics Home Reference (NIH)ADAM33
Genomic and cartography
GoldenPath hg38 (UCSC)ADAM33  -     chr20:3667965-3682690 -  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADAM33  -     20p13   [Description]    (hg19-Feb_2009)
EnsemblADAM33 - 20p13 [CytoView hg19]  ADAM33 - 20p13 [CytoView hg38]
Mapping of homologs : NCBIADAM33 [Mapview hg19]  ADAM33 [Mapview hg38]
OMIM607114   
Gene and transcription
Genbank (Entrez)AB055891 AF466287 AF466289 AK092627 AK094070
RefSeq transcript (Entrez)NM_001282447 NM_025220 NM_153202
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADAM33
Cluster EST : UnigeneHs.173716 [ NCBI ]
CGAP (NCI)Hs.173716
Alternative Splicing GalleryENSG00000149451
Gene ExpressionADAM33 [ NCBI-GEO ]   ADAM33 [ EBI - ARRAY_EXPRESS ]   ADAM33 [ SEEK ]   ADAM33 [ MEM ]
Gene Expression Viewer (FireBrowse)ADAM33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80332
GTEX Portal (Tissue expression)ADAM33
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BZ11   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BZ11  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BZ11
Splice isoforms : SwissVarQ9BZ11
Catalytic activity : Enzyme3.4.24.- [ Enzyme-Expasy ]   3.4.24.-3.4.24.- [ IntEnz-EBI ]   3.4.24.- [ BRENDA ]   3.4.24.- [ KEGG ]   
PhosPhoSitePlusQ9BZ11
Domaine pattern : Prosite (Expaxy)ADAM_MEPRO (PS50215)    DISINTEGRIN_1 (PS00427)    DISINTEGRIN_2 (PS50214)    EGF_2 (PS01186)    EGF_3 (PS50026)    ZINC_PROTEASE (PS00142)   
Domains : Interpro (EBI)ADAM_Cys-rich    Disintegrin_CS    Disintegrin_dom    EGF-like_CS    EGF-like_dom    MetalloPept_cat_dom    Peptidase_M12B    Peptidase_M12B_N    Reprolysin_adamalysin   
Domain families : Pfam (Sanger)ADAM_CR (PF08516)    Disintegrin (PF00200)    Pep_M12B_propep (PF01562)    Reprolysin (PF01421)   
Domain families : Pfam (NCBI)pfam08516    pfam00200    pfam01562    pfam01421   
Domain families : Smart (EMBL)ACR (SM00608)  DISIN (SM00050)  
Conserved Domain (NCBI)ADAM33
DMDM Disease mutations80332
Blocks (Seattle)ADAM33
PDB (SRS)1R54    1R55   
PDB (PDBSum)1R54    1R55   
PDB (IMB)1R54    1R55   
PDB (RSDB)1R54    1R55   
Structural Biology KnowledgeBase1R54    1R55   
SCOP (Structural Classification of Proteins)1R54    1R55   
CATH (Classification of proteins structures)1R54    1R55   
SuperfamilyQ9BZ11
Human Protein AtlasENSG00000149451
Peptide AtlasQ9BZ11
HPRD06173
IPIIPI00079482   IPI00218715   IPI00642419   IPI00909253   IPI00908474   IPI00941405   IPI01009011   IPI00902689   IPI00872843   IPI00385537   IPI00385539   IPI00182702   IPI00385540   
Protein Interaction databases
DIP (DOE-UCLA)Q9BZ11
IntAct (EBI)Q9BZ11
FunCoupENSG00000149451
BioGRIDADAM33
STRING (EMBL)ADAM33
ZODIACADAM33
Ontologies - Pathways
QuickGOQ9BZ11
Ontology : AmiGOmetalloendopeptidase activity  proteolysis  zinc ion binding  integral component of membrane  
Ontology : EGO-EBImetalloendopeptidase activity  proteolysis  zinc ion binding  integral component of membrane  
NDEx NetworkADAM33
Atlas of Cancer Signalling NetworkADAM33
Wikipedia pathwaysADAM33
Orthology - Evolution
OrthoDB80332
GeneTree (enSembl)ENSG00000149451
Phylogenetic Trees/Animal Genes : TreeFamADAM33
HOVERGENQ9BZ11
HOGENOMQ9BZ11
Homologs : HomoloGeneADAM33
Homology/Alignments : Family Browser (UCSC)ADAM33
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADAM33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADAM33
dbVarADAM33
ClinVarADAM33
1000_GenomesADAM33 
Exome Variant ServerADAM33
ExAC (Exome Aggregation Consortium)ADAM33 (select the gene name)
Genetic variants : HAPMAP80332
Genomic Variants (DGV)ADAM33 [DGVbeta]
DECIPHERADAM33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADAM33 
Mutations
ICGC Data PortalADAM33 
TCGA Data PortalADAM33 
Broad Tumor PortalADAM33
OASIS PortalADAM33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADAM33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADAM33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ADAM33
DgiDB (Drug Gene Interaction Database)ADAM33
DoCM (Curated mutations)ADAM33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADAM33 (select a term)
intoGenADAM33
Cancer3DADAM33(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607114   
Orphanet
MedgenADAM33
Genetic Testing Registry ADAM33
NextProtQ9BZ11 [Medical]
TSGene80332
GENETestsADAM33
Target ValidationADAM33
Huge Navigator ADAM33 [HugePedia]
snp3D : Map Gene to Disease80332
BioCentury BCIQADAM33
ClinGenADAM33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80332
Chemical/Pharm GKB GenePA24526
Clinical trialADAM33
Miscellaneous
canSAR (ICR)ADAM33 (select the gene name)
Probes
Litterature
PubMed132 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADAM33
EVEXADAM33
GoPubMedADAM33
iHOPADAM33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:22:44 CEST 2017

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