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ADAM7 (ADAM metallopeptidase domain 7)

Identity

Other namesADAM 7
ADAM-7
EAPI
GP-83
GP83
HGNC (Hugo) ADAM7
LocusID (NCBI) 8756
Atlas_Id 47106
Location 8p21.2
Location_base_pair Starts at 24298509 and ends at 24367077 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ADAM7   214
Cards
Entrez_Gene (NCBI)ADAM7  8756  ADAM metallopeptidase domain 7
GeneCards (Weizmann)ADAM7
Ensembl hg19 (Hinxton)ENSG00000069206 [Gene_View]  chr8:24298509-24367077 [Contig_View]  ADAM7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000069206 [Gene_View]  chr8:24298509-24367077 [Contig_View]  ADAM7 [Vega]
ICGC DataPortalENSG00000069206
TCGA cBioPortalADAM7
AceView (NCBI)ADAM7
Genatlas (Paris)ADAM7
WikiGenes8756
SOURCE (Princeton)ADAM7
Genomic and cartography
GoldenPath hg19 (UCSC)ADAM7  -     chr8:24298509-24367077 +  8p21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ADAM7  -     8p21.2   [Description]    (hg38-Dec_2013)
EnsemblADAM7 - 8p21.2 [CytoView hg19]  ADAM7 - 8p21.2 [CytoView hg38]
Mapping of homologs : NCBIADAM7 [Mapview hg19]  ADAM7 [Mapview hg38]
OMIM607310   
Gene and transcription
Genbank (Entrez)AF090327 AF215824 AK292492 BC043207 BC058037
RefSeq transcript (Entrez)NM_003817
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_167187 NW_004929337
Consensus coding sequences : CCDS (NCBI)ADAM7
Cluster EST : UnigeneHs.116147 [ NCBI ]
CGAP (NCI)Hs.116147
Alternative Splicing : Fast-db (Paris)GSHG0028895
Alternative Splicing GalleryENSG00000069206
Gene ExpressionADAM7 [ NCBI-GEO ]     ADAM7 [ SEEK ]   ADAM7 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H2U9 (Uniprot)
NextProtQ9H2U9  [Medical]
With graphics : InterProQ9H2U9
Splice isoforms : SwissVarQ9H2U9 (Swissvar)
Domaine pattern : Prosite (Expaxy)ADAM_MEPRO (PS50215)    DISINTEGRIN_1 (PS00427)    DISINTEGRIN_2 (PS50214)   
Domains : Interpro (EBI)ADAM_Cys-rich    Blood-coag_inhib_Disintegrin    Disintegrin_CS    MetalloPept_cat_dom    Peptidase_M12B    Peptidase_M12B_N   
Related proteins : CluSTrQ9H2U9
Domain families : Pfam (Sanger)ADAM_CR (PF08516)    Disintegrin (PF00200)    Pep_M12B_propep (PF01562)    Reprolysin (PF01421)   
Domain families : Pfam (NCBI)pfam08516    pfam00200    pfam01562    pfam01421   
Domain families : Smart (EMBL)ACR (SM00608)  DISIN (SM00050)  
DMDM Disease mutations8756
Blocks (Seattle)Q9H2U9
Human Protein AtlasENSG00000069206
Peptide AtlasQ9H2U9
HPRD07391
IPIIPI00023134   IPI00657822   IPI00447495   IPI00977763   
Protein Interaction databases
DIP (DOE-UCLA)Q9H2U9
IntAct (EBI)Q9H2U9
FunCoupENSG00000069206
BioGRIDADAM7
IntegromeDBADAM7
STRING (EMBL)ADAM7
Ontologies - Pathways
QuickGOQ9H2U9
Ontology : AmiGOmetalloendopeptidase activity  plasma membrane  proteolysis  zinc ion binding  integral component of membrane  
Ontology : EGO-EBImetalloendopeptidase activity  plasma membrane  proteolysis  zinc ion binding  integral component of membrane  
Protein Interaction DatabaseADAM7
DoCM (Curated mutations)ADAM7
Wikipedia pathwaysADAM7
Gene fusion - Rearrangements
Gene fusion: TCGA
Polymorphisms : SNP, variants
NCBI Variation ViewerADAM7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADAM7
dbVarADAM7
ClinVarADAM7
1000_GenomesADAM7 
Exome Variant ServerADAM7
SNP (GeneSNP Utah)ADAM7
SNP : HGBaseADAM7
Genetic variants : HAPMAPADAM7
Genomic Variants (DGV)ADAM7 [DGVbeta]
Mutations
ICGC Data PortalADAM7 
TCGA Data PortalADAM7 
Tumor PortalADAM7
Somatic Mutations in Cancer : COSMICADAM7 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
Diseases
DECIPHER (Syndromes)8:24298509-24367077
CONAN: Copy Number AnalysisADAM7 
Mutations and Diseases : HGMDADAM7
OMIM607310   
MedgenADAM7
NextProtQ9H2U9 [Medical]
GENETestsADAM7
Disease Genetic AssociationADAM7
Huge Navigator ADAM7 [HugePedia]  ADAM7 [HugeCancerGEM]
snp3D : Map Gene to Disease8756
DGIdb (Drug Gene Interaction db)ADAM7
General knowledge
Homologs : HomoloGeneADAM7
Homology/Alignments : Family Browser (UCSC)ADAM7
Phylogenetic Trees/Animal Genes : TreeFamADAM7
Chemical/Protein Interactions : CTD8756
Chemical/Pharm GKB GenePA24532
Clinical trialADAM7
Cancer Resource (Charite)ENSG00000069206
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
CoreMineADAM7
GoPubMedADAM7
iHOPADAM7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated02-2015Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Apr 13 13:59:13 CEST 2015

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