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ADAMDEC1 (ADAM-like, decysin 1)

Identity

Other namesM12.219
HGNC (Hugo) ADAMDEC1
LocusID (NCBI) 27299
Location 8p21.2
Location_base_pair Starts at 24241798 and ends at 24263526 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ADAMDEC1   16299
Entrez_Gene (NCBI)ADAMDEC1  27299  ADAM-like, decysin 1
Cards
GeneCards (Weizmann)ADAMDEC1
Ensembl (Hinxton)ENSG00000134028 [Gene_View]  chr8:24241798-24263526 [Contig_View]  ADAMDEC1 [Vega]
AceView (NCBI)ADAMDEC1
Genatlas (Paris)ADAMDEC1
SOURCE (Stanford)NM_001145271 NM_001145272 NM_014479
Genomic and cartography
GoldenPath (UCSC)ADAMDEC1  -  8p21.2   chr8:24241798-24263526 +  8p21.2   [Description]    (hg19-Feb_2009)
EnsemblADAMDEC1 - 8p21.2 [CytoView]
Mapping of homologs : NCBIADAMDEC1 [Mapview]
OMIM606393   
Gene and transcription
Genbank (Entrez)AK300959 AK301007 AK311528 AK316320 AK316322
RefSeq transcript (SRS)NM_001145271 NM_001145272 NM_014479
RefSeq transcript (Entrez)NM_001145271 NM_001145272 NM_014479
RefSeq genomic (SRS)AC_000140 NC_000008 NC_018919 NT_167187 NW_001839127 NW_004078035
RefSeq genomic (Entrez)AC_000140 NC_000008 NC_018919 NT_167187 NW_001839127 NW_004078035
Consensus coding sequences : CCDS (NCBI)ADAMDEC1
Cluster EST : UnigeneHs.521459 [ SRS ] Hs.521459 [ NCBI ]
CGAP (NCI)Hs.521459
Alternative Splicing : Fast-db (Paris)GSHG0028894
Alternative Splicing GalleryENSG00000134028
Gene ExpressionADAMDEC1 [ NCBI-GEO ]   ADAMDEC1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15204 (SRS) O15204 (Uniprot)
NextProtO15204
With graphics : InterProO15204
Splice isoforms : SwissVarO15204(Swissvar)
Domaine pattern : Prosite (SRS)ADAM_MEPRO (PS50215)    CYSTEINE_SWITCH (PS00546)    DISINTEGRIN_1 (PS00427)    DISINTEGRIN_2 (PS50214)    ZINC_PROTEASE (PS00142)   
Domaine pattern : Prosite (Expaxy)ADAM_MEPRO (PS50215)    CYSTEINE_SWITCH (PS00546)    DISINTEGRIN_1 (PS00427)    DISINTEGRIN_2 (PS50214)    ZINC_PROTEASE (PS00142)   
Domains : Interpro (SRS)Blood-coag_inhib_Disintegrin    MetalloPept_cat_dom    Peptidase_M12B    Peptidase_M12B_N   
Domains : Interpro (EBI)Blood-coag_inhib_Disintegrin    MetalloPept_cat_dom    Peptidase_M12B    Peptidase_M12B_N   
Related proteins : CluSTrO15204
Domain families : Pfam (SRS)Disintegrin (PF00200)    Pep_M12B_propep (PF01562)    Reprolysin (PF01421)   
Domain families : Pfam (Sanger)Disintegrin (PF00200)    Pep_M12B_propep (PF01562)    Reprolysin (PF01421)   
Domain families : Pfam (NCBI)pfam00200    pfam01562    pfam01421   
Domain families : Smart (EMBL)DISIN (SM00050)  
DMDM27299
Blocks (Seattle)O15204
Human Protein AtlasENSG00000134028
HPRD07070
IPIIPI00004480   IPI00922737   IPI00974186   
Protein Interaction databases
DIP (DOE-UCLA)O15204
IntAct (EBI)O15204
FunCoupENSG00000134028
REACTOMEADAMDEC1
Protein Interaction Database27299
BioGRIDADAMDEC1
InParanoidO15204
Interologous Interaction database O15204
IntegromeDBADAMDEC1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ADAMDEC1
SNP (GeneSNP Utah)ADAMDEC1
SNP : HGBaseADAMDEC1
Genetic variants : HAPMAPADAMDEC1
Somatic Mutations in Cancer : COSMICADAMDEC1 
CONAN: Copy Number AnalysisADAMDEC1 
Mutations and Diseases : HGMDADAMDEC1
OMIM606393   
GENETests606393   
Disease Genetic AssociationADAMDEC1
Huge Navigator ADAMDEC1 [HugePedia]  ADAMDEC1 [HugeCancerGEM]
Genomic VariantsADAMDEC1  ADAMDEC1 [DGVbeta]
snp3D : Map Gene to Disease27299
General knowledge
Homologs : HomoloGeneADAMDEC1
Homology/Alignments : Family Browser (UCSC)ADAMDEC1
Phylogenetic Trees/Animal Genes : TreeFamADAMDEC1
Catalytic activity : Enzyme3.4.24.- [ Enzyme-Expasy ]   3.4.24.- [ Enzyme-SRS ]   3.4.24.- [ IntEnz-EBI ]   3.4.24.- [ BRENDA ]   3.4.24.- [ KEGG ]   
Chemical/Protein Interactions : CTD27299
Chemical/Pharm GKB GenePA24535
Clinical trialADAMDEC1
Cancer Resource (Charite)ENSG00000134028
Ontology : AmiGOmetalloendopeptidase activity  cellular_component  extracellular region  proteolysis  immune response  negative regulation of cell adhesion  zinc ion binding  metal ion binding  
Ontology : EGO-EBImetalloendopeptidase activity  cellular_component  extracellular region  proteolysis  immune response  negative regulation of cell adhesion  zinc ion binding  metal ion binding  
Other databases
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
PubGeneADAMDEC1
iHOPADAMDEC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:43:53 CEST 2013
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