Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ADAMTS9-AS1 (ADAMTS9 antisense RNA 1)

Identity

Alias_namesADAMTS9 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ADAMTS9-AS1
LocusID (NCBI) 101929335
Atlas_Id 60143
Location 3p14.1  [Link to chromosome band 3p14]
Location_base_pair Starts at 64561346 and ends at 64590084 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADAMTS9-AS1   40625
Cards
Entrez_Gene (NCBI)ADAMTS9-AS1  101929335  ADAMTS9 antisense RNA 1
Aliases
GeneCards (Weizmann)ADAMTS9-AS1
Ensembl hg19 (Hinxton)ENSG00000241158 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241158 [Gene_View]  chr3:64561346-64590084 [Contig_View]  ADAMTS9-AS1 [Vega]
ICGC DataPortalENSG00000241158
TCGA cBioPortalADAMTS9-AS1
AceView (NCBI)ADAMTS9-AS1
Genatlas (Paris)ADAMTS9-AS1
WikiGenes101929335
SOURCE (Princeton)ADAMTS9-AS1
Genetics Home Reference (NIH)ADAMTS9-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ADAMTS9-AS1  -     chr3:64561346-64590084 +  3p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADAMTS9-AS1  -     3p14.1   [Description]    (hg19-Feb_2009)
EnsemblADAMTS9-AS1 - 3p14.1 [CytoView hg19]  ADAMTS9-AS1 - 3p14.1 [CytoView hg38]
Mapping of homologs : NCBIADAMTS9-AS1 [Mapview hg19]  ADAMTS9-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056845 AK125532 BC071789 DA222486
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADAMTS9-AS1
Cluster EST : UnigeneHs.476604 [ NCBI ]
CGAP (NCI)Hs.476604
Alternative Splicing GalleryENSG00000241158
Gene ExpressionADAMTS9-AS1 [ NCBI-GEO ]   ADAMTS9-AS1 [ EBI - ARRAY_EXPRESS ]   ADAMTS9-AS1 [ SEEK ]   ADAMTS9-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADAMTS9-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929335
GTEX Portal (Tissue expression)ADAMTS9-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ADAMTS9-AS1
DMDM Disease mutations101929335
Blocks (Seattle)ADAMTS9-AS1
Human Protein AtlasENSG00000241158
Protein Interaction databases
FunCoupENSG00000241158
BioGRIDADAMTS9-AS1
STRING (EMBL)ADAMTS9-AS1
ZODIACADAMTS9-AS1
Ontologies - Pathways
Huge Navigator ADAMTS9-AS1 [HugePedia]
snp3D : Map Gene to Disease101929335
BioCentury BCIQADAMTS9-AS1
ClinGenADAMTS9-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929335
Clinical trialADAMTS9-AS1
Miscellaneous
canSAR (ICR)ADAMTS9-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADAMTS9-AS1
EVEXADAMTS9-AS1
GoPubMedADAMTS9-AS1
iHOPADAMTS9-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:37:28 CEST 2017

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