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ADAMTS9-AS2 (ADAMTS9 antisense RNA 2)

Identity

Alias_namesADAMTS9 antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) ADAMTS9-AS2
LocusID (NCBI) 100507098
Atlas_Id 60144
Location 3p14.1  [Link to chromosome band 3p14]
Location_base_pair Starts at 64684870 and ends at 65011471 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CASC5 (15q15.1) / ADAMTS9-AS2 (3p14.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADAMTS9-AS2   42435
Cards
Entrez_Gene (NCBI)ADAMTS9-AS2  100507098  ADAMTS9 antisense RNA 2
Aliases
GeneCards (Weizmann)ADAMTS9-AS2
Ensembl hg19 (Hinxton)ENSG00000241684 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241684 [Gene_View]  chr3:64684870-65011471 [Contig_View]  ADAMTS9-AS2 [Vega]
ICGC DataPortalENSG00000241684
TCGA cBioPortalADAMTS9-AS2
AceView (NCBI)ADAMTS9-AS2
Genatlas (Paris)ADAMTS9-AS2
WikiGenes100507098
SOURCE (Princeton)ADAMTS9-AS2
Genetics Home Reference (NIH)ADAMTS9-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)ADAMTS9-AS2  -     chr3:64684870-65011471 +  3p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADAMTS9-AS2  -     3p14.1   [Description]    (hg19-Feb_2009)
EnsemblADAMTS9-AS2 - 3p14.1 [CytoView hg19]  ADAMTS9-AS2 - 3p14.1 [CytoView hg38]
Mapping of homologs : NCBIADAMTS9-AS2 [Mapview hg19]  ADAMTS9-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057923 AL832788 BC040632 DA927615
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADAMTS9-AS2
Cluster EST : UnigeneHs.660881 [ NCBI ]
CGAP (NCI)Hs.660881
Alternative Splicing GalleryENSG00000241684
Gene ExpressionADAMTS9-AS2 [ NCBI-GEO ]   ADAMTS9-AS2 [ EBI - ARRAY_EXPRESS ]   ADAMTS9-AS2 [ SEEK ]   ADAMTS9-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)ADAMTS9-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507098
GTEX Portal (Tissue expression)ADAMTS9-AS2
Human Protein AtlasENSG00000241684-ADAMTS9-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ADAMTS9-AS2
DMDM Disease mutations100507098
Blocks (Seattle)ADAMTS9-AS2
Human Protein Atlas [tissue]ENSG00000241684-ADAMTS9-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000241684
BioGRIDADAMTS9-AS2
STRING (EMBL)ADAMTS9-AS2
ZODIACADAMTS9-AS2
Ontologies - Pathways
Huge Navigator ADAMTS9-AS2 [HugePedia]
snp3D : Map Gene to Disease100507098
BioCentury BCIQADAMTS9-AS2
ClinGenADAMTS9-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507098
Clinical trialADAMTS9-AS2
Miscellaneous
canSAR (ICR)ADAMTS9-AS2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADAMTS9-AS2
EVEXADAMTS9-AS2
GoPubMedADAMTS9-AS2
iHOPADAMTS9-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:37:05 CET 2017

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