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ADARB1 (adenosine deaminase RNA specific B1)

Identity

Alias (NCBI)ADAR2
DRABA2
DRADA2
NEDHYMS
RED1
HGNC (Hugo) ADARB1
HGNC Alias symbADAR2
DRADA2
ADAR2g
DRABA2
RED1
hRED1
ADAR2a-L1
ADAR2a-L2
ADAR2a-L3
ADAR2a
ADAR2b
ADAR2c
ADAR2d
HGNC Alias nameRED1 homolog (rat)
HGNC Previous nameadenosine deaminase, RNA-specific, B1 (homolog of rat RED1)
LocusID (NCBI) 104
Atlas_Id 53086
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 45074580 and ends at 45226560 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ADARB1 (21q22.3) / ADARB1 (21q22.3)ADARB1 (21q22.3) / NFKBIZ (3q12.3)CLEC2B (12p13.31) / ADARB1 (21q22.3)
COL18A1 (21q22.3) / ADARB1 (21q22.3)SBNO2 (19p13.3) / ADARB1 (21q22.3)COL18A1 21q22.3 / ADARB1 21q22.3
SBNO2 19p13.3 / ADARB1 21q22.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ADARB1   226
Cards
Entrez_Gene (NCBI)ADARB1    adenosine deaminase RNA specific B1
AliasesADAR2; DRABA2; DRADA2; NEDHYMS; 
RED1
GeneCards (Weizmann)ADARB1
Ensembl hg19 (Hinxton)ENSG00000197381 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197381 [Gene_View]  ENSG00000197381 [Sequence]  chr21:45074580-45226560 [Contig_View]  ADARB1 [Vega]
ICGC DataPortalENSG00000197381
TCGA cBioPortalADARB1
AceView (NCBI)ADARB1
Genatlas (Paris)ADARB1
SOURCE (Princeton)ADARB1
Genetics Home Reference (NIH)ADARB1
Genomic and cartography
GoldenPath hg38 (UCSC)ADARB1  -     chr21:45074580-45226560 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADARB1  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathADARB1 - 21q22.3 [CytoView hg19]  ADARB1 - 21q22.3 [CytoView hg38]
ImmunoBaseENSG00000197381
Genome Data Viewer NCBIADARB1 [Mapview hg19]  
OMIM601218   618862   
Gene and transcription
Genbank (Entrez)AB194369 AB194370 AB194371 AB194372 AB194373
RefSeq transcript (Entrez)NM_001033049 NM_001112 NM_001160230 NM_001346687 NM_001346688 NM_015833 NM_015834
Consensus coding sequences : CCDS (NCBI)ADARB1
Gene ExpressionADARB1 [ NCBI-GEO ]   ADARB1 [ EBI - ARRAY_EXPRESS ]   ADARB1 [ SEEK ]   ADARB1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADARB1 [ Firebrowse - Broad ]
GenevisibleExpression of ADARB1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)104
GTEX Portal (Tissue expression)ADARB1
Human Protein AtlasENSG00000197381-ADARB1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ADARB1
Human Protein Atlas [tissue]ENSG00000197381-ADARB1 [tissue]
HPRD06777
Protein Interaction databases
BioGRIDADARB1
STRING (EMBL)ADARB1
ZODIACADARB1
Ontologies - Pathways
Litterature
PubMed102 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXADARB1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 14:58:31 CEST 2021

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