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ADAT3 (adenosine deaminase tRNA specific 3)

Identity

Alias (NCBI)FWP005
MRT36
MST121
MSTP121
S863-5
TAD3
HGNC (Hugo) ADAT3
HGNC Alias symbTAD3
HGNC Alias nametRNA-specific adenosine deaminase 3 homolog (S. cerevisiae)
HGNC Previous nameadenosine deaminase, tRNA-specific 3, TAD3 homolog (S. cerevisiae)
LocusID (NCBI) 113179
Atlas_Id 60153
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 1905399 and ends at 1913447 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ADAT3   25151
Cards
Entrez_Gene (NCBI)ADAT3    adenosine deaminase tRNA specific 3
AliasesFWP005; MRT36; MST121; MSTP121; 
S863-5; TAD3
GeneCards (Weizmann)ADAT3
Ensembl hg19 (Hinxton)ENSG00000213638 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213638 [Gene_View]  ENSG00000213638 [Sequence]  chr19:1905399-1913447 [Contig_View]  ADAT3 [Vega]
ICGC DataPortalENSG00000213638
TCGA cBioPortalADAT3
AceView (NCBI)ADAT3
Genatlas (Paris)ADAT3
SOURCE (Princeton)ADAT3
Genetics Home Reference (NIH)ADAT3
Genomic and cartography
GoldenPath hg38 (UCSC)ADAT3  -     chr19:1905399-1913447 +  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADAT3  -     19p13.3   [Description]    (hg19-Feb_2009)
GoldenPathADAT3 - 19p13.3 [CytoView hg19]  ADAT3 - 19p13.3 [CytoView hg38]
ImmunoBaseENSG00000213638
Genome Data Viewer NCBIADAT3 [Mapview hg19]  
OMIM615286   615302   
Gene and transcription
Genbank (Entrez)BC011824 DB127534 HY023983 HY030731
RefSeq transcript (Entrez)NM_001329533 NM_138422
Consensus coding sequences : CCDS (NCBI)ADAT3
Gene ExpressionADAT3 [ NCBI-GEO ]   ADAT3 [ EBI - ARRAY_EXPRESS ]   ADAT3 [ SEEK ]   ADAT3 [ MEM ]
Gene Expression Viewer (FireBrowse)ADAT3 [ Firebrowse - Broad ]
GenevisibleExpression of ADAT3 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)113179
GTEX Portal (Tissue expression)ADAT3
Human Protein AtlasENSG00000213638-ADAT3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96EY9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96EY9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96EY9
PhosPhoSitePlusQ96EY9
Domaine pattern : Prosite (Expaxy)CYT_DCMP_DEAMINASES_2 (PS51747)   
Domains : Interpro (EBI)CMP_dCMP_dom    Cytidine_deaminase-like   
Domain families : Pfam (Sanger)dCMP_cyt_deam_1 (PF00383)   
Domain families : Pfam (NCBI)pfam00383   
Conserved Domain (NCBI)ADAT3
SuperfamilyQ96EY9
AlphaFold pdb e-kbQ96EY9   
Human Protein Atlas [tissue]ENSG00000213638-ADAT3 [tissue]
HPRD14000
Protein Interaction databases
DIP (DOE-UCLA)Q96EY9
IntAct (EBI)Q96EY9
BioGRIDADAT3
STRING (EMBL)ADAT3
ZODIACADAT3
Ontologies - Pathways
QuickGOQ96EY9
Ontology : AmiGOprotein binding  nucleoplasm  tRNA modification  metal ion binding  tRNA-specific adenosine-34 deaminase activity  
Ontology : EGO-EBIprotein binding  nucleoplasm  tRNA modification  metal ion binding  tRNA-specific adenosine-34 deaminase activity  
NDEx NetworkADAT3
Atlas of Cancer Signalling NetworkADAT3
Wikipedia pathwaysADAT3
Orthology - Evolution
OrthoDB113179
GeneTree (enSembl)ENSG00000213638
Phylogenetic Trees/Animal Genes : TreeFamADAT3
Homologs : HomoloGeneADAT3
Homology/Alignments : Family Browser (UCSC)ADAT3
Gene fusions - Rearrangements
Fusion : QuiverADAT3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADAT3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADAT3
dbVarADAT3
ClinVarADAT3
MonarchADAT3
1000_GenomesADAT3 
Exome Variant ServerADAT3
GNOMAD BrowserENSG00000213638
Varsome BrowserADAT3
ACMGADAT3 variants
VarityQ96EY9
Genomic Variants (DGV)ADAT3 [DGVbeta]
DECIPHERADAT3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADAT3 
Mutations
ICGC Data PortalADAT3 
TCGA Data PortalADAT3 
Broad Tumor PortalADAT3
OASIS PortalADAT3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADAT3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DADAT3
Mutations and Diseases : HGMDADAT3
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaADAT3
DgiDB (Drug Gene Interaction Database)ADAT3
DoCM (Curated mutations)ADAT3
CIViC (Clinical Interpretations of Variants in Cancer)ADAT3
Cancer3DADAT3
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615286    615302   
Orphanet22318   
DisGeNETADAT3
MedgenADAT3
Genetic Testing Registry ADAT3
NextProtQ96EY9 [Medical]
GENETestsADAT3
Target ValidationADAT3
Huge Navigator ADAT3 [HugePedia]
ClinGenADAT3
Clinical trials, drugs, therapy
MyCancerGenomeADAT3
Protein Interactions : CTDADAT3
Pharm GKB GenePA162375609
PharosQ96EY9
Clinical trialADAT3
Miscellaneous
canSAR (ICR)ADAT3
HarmonizomeADAT3
DataMed IndexADAT3
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXADAT3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:41:33 CEST 2021

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