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ADCK1 (aarF domain containing kinase 1)

Identity

Alias_symbol (synonym)FLJ39600
Other alias-
HGNC (Hugo) ADCK1
LocusID (NCBI) 57143
Atlas_Id 43102
Location 14q24.3  [Link to chromosome band 14q24]
Location_base_pair Starts at 77800083 and ends at 77933954 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADCK1   19038
Cards
Entrez_Gene (NCBI)ADCK1  57143  aarF domain containing kinase 1
Aliases
GeneCards (Weizmann)ADCK1
Ensembl hg19 (Hinxton)ENSG00000063761 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000063761 [Gene_View]  chr14:77800083-77933954 [Contig_View]  ADCK1 [Vega]
ICGC DataPortalENSG00000063761
TCGA cBioPortalADCK1
AceView (NCBI)ADCK1
Genatlas (Paris)ADCK1
WikiGenes57143
SOURCE (Princeton)ADCK1
Genetics Home Reference (NIH)ADCK1
Genomic and cartography
GoldenPath hg38 (UCSC)ADCK1  -     chr14:77800083-77933954 +  14q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADCK1  -     14q24.3   [Description]    (hg19-Feb_2009)
EnsemblADCK1 - 14q24.3 [CytoView hg19]  ADCK1 - 14q24.3 [CytoView hg38]
Mapping of homologs : NCBIADCK1 [Mapview hg19]  ADCK1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI866496 AK096919 AK126928 AK299430 BC017459
RefSeq transcript (Entrez)NM_001142545 NM_020421
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADCK1
Cluster EST : UnigeneHs.413208 [ NCBI ]
CGAP (NCI)Hs.413208
Alternative Splicing GalleryENSG00000063761
Gene ExpressionADCK1 [ NCBI-GEO ]   ADCK1 [ EBI - ARRAY_EXPRESS ]   ADCK1 [ SEEK ]   ADCK1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADCK1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57143
GTEX Portal (Tissue expression)ADCK1
Human Protein AtlasENSG00000063761-ADCK1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86TW2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86TW2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86TW2
Splice isoforms : SwissVarQ86TW2
Catalytic activity : Enzyme2.7.11.- [ Enzyme-Expasy ]   2.7.11.-2.7.11.- [ IntEnz-EBI ]   2.7.11.- [ BRENDA ]   2.7.11.- [ KEGG ]   
PhosPhoSitePlusQ86TW2
Domains : Interpro (EBI)Kinase-like_dom    UbiB_dom   
Domain families : Pfam (Sanger)ABC1 (PF03109)   
Domain families : Pfam (NCBI)pfam03109   
Conserved Domain (NCBI)ADCK1
DMDM Disease mutations57143
Blocks (Seattle)ADCK1
SuperfamilyQ86TW2
Human Protein Atlas [tissue]ENSG00000063761-ADCK1 [tissue]
Peptide AtlasQ86TW2
HPRD10630
IPIIPI00787836   IPI00412099   IPI00910696   IPI01025036   IPI01024936   IPI00872523   
Protein Interaction databases
DIP (DOE-UCLA)Q86TW2
IntAct (EBI)Q86TW2
FunCoupENSG00000063761
BioGRIDADCK1
STRING (EMBL)ADCK1
ZODIACADCK1
Ontologies - Pathways
QuickGOQ86TW2
Ontology : AmiGOprotein serine/threonine kinase activity  ATP binding  extracellular region  mitochondrion  protein phosphorylation  
Ontology : EGO-EBIprotein serine/threonine kinase activity  ATP binding  extracellular region  mitochondrion  protein phosphorylation  
NDEx NetworkADCK1
Atlas of Cancer Signalling NetworkADCK1
Wikipedia pathwaysADCK1
Orthology - Evolution
OrthoDB57143
GeneTree (enSembl)ENSG00000063761
Phylogenetic Trees/Animal Genes : TreeFamADCK1
HOVERGENQ86TW2
HOGENOMQ86TW2
Homologs : HomoloGeneADCK1
Homology/Alignments : Family Browser (UCSC)ADCK1
Gene fusions - Rearrangements
Tumor Fusion PortalADCK1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADCK1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADCK1
dbVarADCK1
ClinVarADCK1
1000_GenomesADCK1 
Exome Variant ServerADCK1
ExAC (Exome Aggregation Consortium)ENSG00000063761
GNOMAD BrowserENSG00000063761
Genetic variants : HAPMAP57143
Genomic Variants (DGV)ADCK1 [DGVbeta]
DECIPHERADCK1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADCK1 
Mutations
ICGC Data PortalADCK1 
TCGA Data PortalADCK1 
Broad Tumor PortalADCK1
OASIS PortalADCK1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADCK1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADCK1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch ADCK1
DgiDB (Drug Gene Interaction Database)ADCK1
DoCM (Curated mutations)ADCK1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADCK1 (select a term)
intoGenADCK1
Cancer3DADCK1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETADCK1
MedgenADCK1
Genetic Testing Registry ADCK1
NextProtQ86TW2 [Medical]
TSGene57143
GENETestsADCK1
Target ValidationADCK1
Huge Navigator ADCK1 [HugePedia]
snp3D : Map Gene to Disease57143
BioCentury BCIQADCK1
ClinGenADCK1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57143
Chemical/Pharm GKB GenePA134861355
Clinical trialADCK1
Miscellaneous
canSAR (ICR)ADCK1 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADCK1
EVEXADCK1
GoPubMedADCK1
iHOPADCK1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:02:09 CET 2017

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