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ADCK2 (aarF domain containing kinase 2)

Identity

Alias_symbol (synonym)MGC20727
Other aliasAARF
HGNC (Hugo) ADCK2
LocusID (NCBI) 90956
Atlas_Id 43103
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 140673153 and ends at 140695108 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ADCK2 (7q34) / DPP6 (7q36.2)HIPK2 (7q34) / ADCK2 (7q34)PRKAG2 (7q36.1) / ADCK2 (7q34)
ADCK2 7q34 / DPP6 7q36.2HIPK2 7q34 / ADCK2 7q34PRKAG2 7q36.1 / ADCK2 7q34

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADCK2   19039
Cards
Entrez_Gene (NCBI)ADCK2  90956  aarF domain containing kinase 2
AliasesAARF
GeneCards (Weizmann)ADCK2
Ensembl hg19 (Hinxton)ENSG00000133597 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000133597 [Gene_View]  chr7:140673153-140695108 [Contig_View]  ADCK2 [Vega]
ICGC DataPortalENSG00000133597
TCGA cBioPortalADCK2
AceView (NCBI)ADCK2
Genatlas (Paris)ADCK2
WikiGenes90956
SOURCE (Princeton)ADCK2
Genetics Home Reference (NIH)ADCK2
Genomic and cartography
GoldenPath hg38 (UCSC)ADCK2  -     chr7:140673153-140695108 +  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADCK2  -     7q34   [Description]    (hg19-Feb_2009)
EnsemblADCK2 - 7q34 [CytoView hg19]  ADCK2 - 7q34 [CytoView hg38]
Mapping of homologs : NCBIADCK2 [Mapview hg19]  ADCK2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF131745 AY302592 BC014107
RefSeq transcript (Entrez)NM_052853
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADCK2
Cluster EST : UnigeneHs.744886 [ NCBI ]
CGAP (NCI)Hs.744886
Alternative Splicing GalleryENSG00000133597
Gene ExpressionADCK2 [ NCBI-GEO ]   ADCK2 [ EBI - ARRAY_EXPRESS ]   ADCK2 [ SEEK ]   ADCK2 [ MEM ]
Gene Expression Viewer (FireBrowse)ADCK2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90956
GTEX Portal (Tissue expression)ADCK2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z695   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z695  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z695
Splice isoforms : SwissVarQ7Z695
PhosPhoSitePlusQ7Z695
Domains : Interpro (EBI)Kinase-like_dom    UbiB_dom   
Domain families : Pfam (Sanger)ABC1 (PF03109)   
Domain families : Pfam (NCBI)pfam03109   
Conserved Domain (NCBI)ADCK2
DMDM Disease mutations90956
Blocks (Seattle)ADCK2
SuperfamilyQ7Z695
Human Protein AtlasENSG00000133597
Peptide AtlasQ7Z695
HPRD10631
IPIIPI00815807   IPI00947471   IPI00944930   IPI00946047   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z695
IntAct (EBI)Q7Z695
FunCoupENSG00000133597
BioGRIDADCK2
STRING (EMBL)ADCK2
ZODIACADCK2
Ontologies - Pathways
QuickGOQ7Z695
Ontology : AmiGOprotein serine/threonine kinase activity  ATP binding  protein phosphorylation  integral component of membrane  
Ontology : EGO-EBIprotein serine/threonine kinase activity  ATP binding  protein phosphorylation  integral component of membrane  
NDEx NetworkADCK2
Atlas of Cancer Signalling NetworkADCK2
Wikipedia pathwaysADCK2
Orthology - Evolution
OrthoDB90956
GeneTree (enSembl)ENSG00000133597
Phylogenetic Trees/Animal Genes : TreeFamADCK2
HOVERGENQ7Z695
HOGENOMQ7Z695
Homologs : HomoloGeneADCK2
Homology/Alignments : Family Browser (UCSC)ADCK2
Gene fusions - Rearrangements
Fusion : MitelmanADCK2/DPP6 [7q34/7q36.2]  
Fusion : MitelmanPRKAG2/ADCK2 [7q36.1/7q34]  [t(7;7)(q34;q36)]  
Fusion: TCGAADCK2 7q34 DPP6 7q36.2 BRCA
Fusion: TCGAHIPK2 7q34 ADCK2 7q34 LUAD
Fusion: TCGAPRKAG2 7q36.1 ADCK2 7q34 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADCK2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADCK2
dbVarADCK2
ClinVarADCK2
1000_GenomesADCK2 
Exome Variant ServerADCK2
ExAC (Exome Aggregation Consortium)ADCK2 (select the gene name)
Genetic variants : HAPMAP90956
Genomic Variants (DGV)ADCK2 [DGVbeta]
DECIPHERADCK2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADCK2 
Mutations
ICGC Data PortalADCK2 
TCGA Data PortalADCK2 
Broad Tumor PortalADCK2
OASIS PortalADCK2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADCK2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADCK2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch ADCK2
DgiDB (Drug Gene Interaction Database)ADCK2
DoCM (Curated mutations)ADCK2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADCK2 (select a term)
intoGenADCK2
Cancer3DADCK2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenADCK2
Genetic Testing Registry ADCK2
NextProtQ7Z695 [Medical]
TSGene90956
GENETestsADCK2
Target ValidationADCK2
Huge Navigator ADCK2 [HugePedia]
snp3D : Map Gene to Disease90956
BioCentury BCIQADCK2
ClinGenADCK2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90956
Chemical/Pharm GKB GenePA134902329
Clinical trialADCK2
Miscellaneous
canSAR (ICR)ADCK2 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADCK2
EVEXADCK2
GoPubMedADCK2
iHOPADCK2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 18:56:16 CEST 2017

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