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ADCK5 (aarF domain containing kinase 5)

Identity

Other names-
HGNC (Hugo) ADCK5
LocusID (NCBI) 203054
Location 8q24.3
Location_base_pair Starts at 145597704 and ends at 145618453 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ADCK5   21738
Cards
Entrez_Gene (NCBI)ADCK5  203054  aarF domain containing kinase 5
GeneCards (Weizmann)ADCK5
Ensembl (Hinxton)ENSG00000173137 [Gene_View]  chr8:145597704-145618453 [Contig_View]  ADCK5 [Vega]
ICGC DataPortalENSG00000173137
AceView (NCBI)ADCK5
Genatlas (Paris)ADCK5
WikiGenes203054
SOURCE (Princeton)NM_174922
Genomic and cartography
GoldenPath (UCSC)ADCK5  -  8q24.3   chr8:145597704-145618453 +  8q24.3   [Description]    (hg19-Feb_2009)
EnsemblADCK5 - 8q24.3 [CytoView]
Mapping of homologs : NCBIADCK5 [Mapview]
Gene and transcription
Genbank (Entrez)AK092773 BC031570 BC032402 BC064345 BC085013
RefSeq transcript (Entrez)NM_174922
RefSeq genomic (Entrez)AC_000140 NC_000008 NC_018919 NT_008046 NW_001839142 NW_004929341
Consensus coding sequences : CCDS (NCBI)ADCK5
Cluster EST : UnigeneHs.283374 [ NCBI ]
CGAP (NCI)Hs.283374
Alternative Splicing : Fast-db (Paris)GSHG0029326
Alternative Splicing GalleryENSG00000173137
Gene ExpressionADCK5 [ NCBI-GEO ]     ADCK5 [ SEEK ]   ADCK5 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3MIX3 (Uniprot)
NextProtQ3MIX3  [Medical]
With graphics : InterProQ3MIX3
Splice isoforms : SwissVarQ3MIX3 (Swissvar)
Domains : Interpro (EBI)Kinase-like_dom    UbiB_dom   
Related proteins : CluSTrQ3MIX3
Domain families : Pfam (Sanger)ABC1 (PF03109)   
Domain families : Pfam (NCBI)pfam03109   
DMDM Disease mutations203054
Blocks (Seattle)Q3MIX3
Human Protein AtlasENSG00000173137
Peptide AtlasQ3MIX3
HPRD12427
IPIIPI00418366   IPI00980662   IPI00981397   
Protein Interaction databases
DIP (DOE-UCLA)Q3MIX3
IntAct (EBI)Q3MIX3
FunCoupENSG00000173137
BioGRIDADCK5
InParanoidQ3MIX3
Interologous Interaction database Q3MIX3
IntegromeDBADCK5
STRING (EMBL)ADCK5
Ontologies - Pathways
Ontology : AmiGOprotein serine/threonine kinase activity  mitochondrion  protein phosphorylation  integral component of membrane  
Ontology : EGO-EBIprotein serine/threonine kinase activity  mitochondrion  protein phosphorylation  integral component of membrane  
Protein Interaction DatabaseADCK5
Wikipedia pathwaysADCK5
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)ADCK5
SNP (GeneSNP Utah)ADCK5
SNP : HGBaseADCK5
Genetic variants : HAPMAPADCK5
1000_GenomesADCK5 
ICGC programENSG00000173137 
CONAN: Copy Number AnalysisADCK5 
Somatic Mutations in Cancer : COSMICADCK5 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
Mutations and Diseases : HGMDADCK5
OMIM
MedgenADCK5
GENETestsADCK5
Disease Genetic AssociationADCK5
Huge Navigator ADCK5 [HugePedia]  ADCK5 [HugeCancerGEM]
Genomic VariantsADCK5  ADCK5 [DGVbeta]
Exome VariantADCK5
dbVarADCK5
ClinVarADCK5
snp3D : Map Gene to Disease203054
General knowledge
Homologs : HomoloGeneADCK5
Homology/Alignments : Family Browser (UCSC)ADCK5
Phylogenetic Trees/Animal Genes : TreeFamADCK5
Chemical/Protein Interactions : CTD203054
Chemical/Pharm GKB GenePA134963849
Clinical trialADCK5
Cancer Resource (Charite)ENSG00000173137
Other databases
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
CoreMineADCK5
iHOPADCK5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 13 12:30:41 CEST 2014

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