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ADGRF2 (adhesion G protein-coupled receptor F2)

Identity

Alias_namesGPR111
G protein-coupled receptor 111
Alias_symbol (synonym)hGPCR35
PGR20
Other alias
HGNC (Hugo) ADGRF2
LocusID (NCBI) 222611
Atlas_Id 76701
Location 6p12.3  [Link to chromosome band 6p12]
Location_base_pair Starts at 47656590 and ends at 47697797 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADGRF2   18991
Cards
Entrez_Gene (NCBI)ADGRF2  222611  adhesion G protein-coupled receptor F2
AliasesGPR111; PGR20; hGPCR35
GeneCards (Weizmann)ADGRF2
Ensembl hg19 (Hinxton)ENSG00000164393 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164393 [Gene_View]  ENSG00000164393 [Sequence]  chr6:47656590-47697797 [Contig_View]  ADGRF2 [Vega]
ICGC DataPortalENSG00000164393
TCGA cBioPortalADGRF2
AceView (NCBI)ADGRF2
Genatlas (Paris)ADGRF2
WikiGenes222611
SOURCE (Princeton)ADGRF2
Genetics Home Reference (NIH)ADGRF2
Genomic and cartography
GoldenPath hg38 (UCSC)ADGRF2  -     chr6:47656590-47697797 +  6p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADGRF2  -     6p12.3   [Description]    (hg19-Feb_2009)
EnsemblADGRF2 - 6p12.3 [CytoView hg19]  ADGRF2 - 6p12.3 [CytoView hg38]
Mapping of homologs : NCBIADGRF2 [Mapview hg19]  ADGRF2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126683 AY140953 AY255612 BC156186 BC157025
RefSeq transcript (Entrez)NM_153839
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADGRF2
Cluster EST : UnigeneHs.724860 [ NCBI ]
CGAP (NCI)Hs.724860
Alternative Splicing GalleryENSG00000164393
Gene ExpressionADGRF2 [ NCBI-GEO ]   ADGRF2 [ EBI - ARRAY_EXPRESS ]   ADGRF2 [ SEEK ]   ADGRF2 [ MEM ]
Gene Expression Viewer (FireBrowse)ADGRF2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222611
GTEX Portal (Tissue expression)ADGRF2
Human Protein AtlasENSG00000164393-ADGRF2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZF7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZF7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZF7
Splice isoforms : SwissVarQ8IZF7
PhosPhoSitePlusQ8IZF7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_4 (PS50261)    GPS (PS50221)   
Domains : Interpro (EBI)GPCR_2-like    GPCR_2_secretin-like    GPS   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    GPS (PF01825)   
Domain families : Pfam (NCBI)pfam00002    pfam01825   
Conserved Domain (NCBI)ADGRF2
DMDM Disease mutations222611
Blocks (Seattle)ADGRF2
SuperfamilyQ8IZF7
Human Protein Atlas [tissue]ENSG00000164393-ADGRF2 [tissue]
Peptide AtlasQ8IZF7
HPRD17055
IPIIPI00218001   IPI00874243   IPI00965688   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZF7
IntAct (EBI)Q8IZF7
FunCoupENSG00000164393
BioGRIDADGRF2
STRING (EMBL)ADGRF2
ZODIACADGRF2
Ontologies - Pathways
QuickGOQ8IZF7
Ontology : AmiGOG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkADGRF2
Atlas of Cancer Signalling NetworkADGRF2
Wikipedia pathwaysADGRF2
Orthology - Evolution
OrthoDB222611
GeneTree (enSembl)ENSG00000164393
Phylogenetic Trees/Animal Genes : TreeFamADGRF2
HOVERGENQ8IZF7
HOGENOMQ8IZF7
Homologs : HomoloGeneADGRF2
Homology/Alignments : Family Browser (UCSC)ADGRF2
Gene fusions - Rearrangements
Fusion : QuiverADGRF2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADGRF2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADGRF2
dbVarADGRF2
ClinVarADGRF2
1000_GenomesADGRF2 
Exome Variant ServerADGRF2
ExAC (Exome Aggregation Consortium)ENSG00000164393
GNOMAD BrowserENSG00000164393
Varsome BrowserADGRF2
Genetic variants : HAPMAP222611
Genomic Variants (DGV)ADGRF2 [DGVbeta]
DECIPHERADGRF2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADGRF2 
Mutations
ICGC Data PortalADGRF2 
TCGA Data PortalADGRF2 
Broad Tumor PortalADGRF2
OASIS PortalADGRF2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDADGRF2
BioMutasearch ADGRF2
DgiDB (Drug Gene Interaction Database)ADGRF2
DoCM (Curated mutations)ADGRF2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADGRF2 (select a term)
intoGenADGRF2
Cancer3DADGRF2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETADGRF2
MedgenADGRF2
Genetic Testing Registry ADGRF2
NextProtQ8IZF7 [Medical]
TSGene222611
GENETestsADGRF2
Target ValidationADGRF2
Huge Navigator ADGRF2 [HugePedia]
snp3D : Map Gene to Disease222611
BioCentury BCIQADGRF2
ClinGenADGRF2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD222611
Chemical/Pharm GKB GenePA134984088
Clinical trialADGRF2
Miscellaneous
canSAR (ICR)ADGRF2 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADGRF2
EVEXADGRF2
GoPubMedADGRF2
iHOPADGRF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:34:46 CEST 2018

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