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ADGRF3 (adhesion G protein-coupled receptor F3)

Identity

Alias_namesGPR113
G protein-coupled receptor 113
Alias_symbol (synonym)hGPCR37
PGR23
Other alias
HGNC (Hugo) ADGRF3
LocusID (NCBI) 165082
Atlas_Id 54863
Location 2p23.3  [Link to chromosome band 2p23]
Location_base_pair Starts at 26309944 and ends at 26319049 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADGRF3   18989
Cards
Entrez_Gene (NCBI)ADGRF3  165082  adhesion G protein-coupled receptor F3
AliasesGPR113; PGR23
GeneCards (Weizmann)ADGRF3
Ensembl hg19 (Hinxton)ENSG00000173567 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173567 [Gene_View]  chr2:26309944-26319049 [Contig_View]  ADGRF3 [Vega]
ICGC DataPortalENSG00000173567
TCGA cBioPortalADGRF3
AceView (NCBI)ADGRF3
Genatlas (Paris)ADGRF3
WikiGenes165082
SOURCE (Princeton)ADGRF3
Genetics Home Reference (NIH)ADGRF3
Genomic and cartography
GoldenPath hg38 (UCSC)ADGRF3  -     chr2:26309944-26319049 -  2p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADGRF3  -     2p23.3   [Description]    (hg19-Feb_2009)
EnsemblADGRF3 - 2p23.3 [CytoView hg19]  ADGRF3 - 2p23.3 [CytoView hg38]
Mapping of homologs : NCBIADGRF3 [Mapview hg19]  ADGRF3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA459569 AK122995 AK293887 AY140955 AY255611
RefSeq transcript (Entrez)NM_001145168 NM_001145169 NM_001321971 NM_001321975 NM_153835
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADGRF3
Cluster EST : UnigeneHs.631878 [ NCBI ]
CGAP (NCI)Hs.631878
Alternative Splicing GalleryENSG00000173567
Gene ExpressionADGRF3 [ NCBI-GEO ]   ADGRF3 [ EBI - ARRAY_EXPRESS ]   ADGRF3 [ SEEK ]   ADGRF3 [ MEM ]
Gene Expression Viewer (FireBrowse)ADGRF3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)165082
GTEX Portal (Tissue expression)ADGRF3
Human Protein AtlasENSG00000173567-ADGRF3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZF5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZF5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZF5
Splice isoforms : SwissVarQ8IZF5
PhosPhoSitePlusQ8IZF5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_2 (PS00650)    G_PROTEIN_RECEP_F2_3 (PS50227)    G_PROTEIN_RECEP_F2_4 (PS50261)    GPS (PS50221)   
Domains : Interpro (EBI)GPCR_2-like    GPCR_2_extracellular_dom    GPCR_2_secretin-like    GPCR_2_secretin-like_CS    GPS   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    GPS (PF01825)    HRM (PF02793)   
Domain families : Pfam (NCBI)pfam00002    pfam01825    pfam02793   
Domain families : Smart (EMBL)GPS (SM00303)  
Conserved Domain (NCBI)ADGRF3
DMDM Disease mutations165082
Blocks (Seattle)ADGRF3
SuperfamilyQ8IZF5
Human Protein Atlas [tissue]ENSG00000173567-ADGRF3 [tissue]
Peptide AtlasQ8IZF5
HPRD11009
IPIIPI00218000   IPI00553242   IPI01009190   IPI00853138   IPI00852794   IPI00853393   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZF5
IntAct (EBI)Q8IZF5
FunCoupENSG00000173567
BioGRIDADGRF3
STRING (EMBL)ADGRF3
ZODIACADGRF3
Ontologies - Pathways
QuickGOQ8IZF5
Ontology : AmiGOG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkADGRF3
Atlas of Cancer Signalling NetworkADGRF3
Wikipedia pathwaysADGRF3
Orthology - Evolution
OrthoDB165082
GeneTree (enSembl)ENSG00000173567
Phylogenetic Trees/Animal Genes : TreeFamADGRF3
HOVERGENQ8IZF5
HOGENOMQ8IZF5
Homologs : HomoloGeneADGRF3
Homology/Alignments : Family Browser (UCSC)ADGRF3
Gene fusions - Rearrangements
Fusion: Tumor Portal ADGRF3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADGRF3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADGRF3
dbVarADGRF3
ClinVarADGRF3
1000_GenomesADGRF3 
Exome Variant ServerADGRF3
ExAC (Exome Aggregation Consortium)ENSG00000173567
GNOMAD BrowserENSG00000173567
Genetic variants : HAPMAP165082
Genomic Variants (DGV)ADGRF3 [DGVbeta]
DECIPHERADGRF3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADGRF3 
Mutations
ICGC Data PortalADGRF3 
TCGA Data PortalADGRF3 
Broad Tumor PortalADGRF3
OASIS PortalADGRF3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDADGRF3
BioMutasearch ADGRF3
DgiDB (Drug Gene Interaction Database)ADGRF3
DoCM (Curated mutations)ADGRF3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADGRF3 (select a term)
intoGenADGRF3
Cancer3DADGRF3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenADGRF3
Genetic Testing Registry ADGRF3
NextProtQ8IZF5 [Medical]
TSGene165082
GENETestsADGRF3
Target ValidationADGRF3
Huge Navigator ADGRF3 [HugePedia]
snp3D : Map Gene to Disease165082
BioCentury BCIQADGRF3
ClinGenADGRF3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD165082
Chemical/Pharm GKB GenePA134918027
Clinical trialADGRF3
Miscellaneous
canSAR (ICR)ADGRF3 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADGRF3
EVEXADGRF3
GoPubMedADGRF3
iHOPADGRF3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:39:25 CET 2017

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