Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ADGRG3 (adhesion G protein-coupled receptor G3)

Identity

Alias_namesGPR97
G protein-coupled receptor 97
Alias_symbol (synonym)Pb99
PGR26
Other aliasPB99
HGNC (Hugo) ADGRG3
LocusID (NCBI) 222487
Atlas_Id 76595
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 57668245 and ends at 57689378 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PUM1 (1p35.2) / ADGRG3 (16q21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADGRG3   13728
Cards
Entrez_Gene (NCBI)ADGRG3  222487  adhesion G protein-coupled receptor G3
AliasesGPR97; PB99; PGR26
GeneCards (Weizmann)ADGRG3
Ensembl hg19 (Hinxton)ENSG00000182885 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182885 [Gene_View]  chr16:57668245-57689378 [Contig_View]  ADGRG3 [Vega]
ICGC DataPortalENSG00000182885
TCGA cBioPortalADGRG3
AceView (NCBI)ADGRG3
Genatlas (Paris)ADGRG3
WikiGenes222487
SOURCE (Princeton)ADGRG3
Genetics Home Reference (NIH)ADGRG3
Genomic and cartography
GoldenPath hg38 (UCSC)ADGRG3  -     chr16:57668245-57689378 +  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADGRG3  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblADGRG3 - 16q21 [CytoView hg19]  ADGRG3 - 16q21 [CytoView hg38]
Mapping of homologs : NCBIADGRG3 [Mapview hg19]  ADGRG3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB049169 AK172801 AK301258 AK310124 AK310311
RefSeq transcript (Entrez)NM_001308360 NM_170776
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADGRG3
Cluster EST : UnigeneHs.383403 [ NCBI ]
CGAP (NCI)Hs.383403
Alternative Splicing GalleryENSG00000182885
Gene ExpressionADGRG3 [ NCBI-GEO ]   ADGRG3 [ EBI - ARRAY_EXPRESS ]   ADGRG3 [ SEEK ]   ADGRG3 [ MEM ]
Gene Expression Viewer (FireBrowse)ADGRG3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222487
GTEX Portal (Tissue expression)ADGRG3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86Y34   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86Y34  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86Y34
Splice isoforms : SwissVarQ86Y34
PhosPhoSitePlusQ86Y34
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_4 (PS50261)    GPS (PS50221)   
Domains : Interpro (EBI)GPCR_2-like    GPCR_2_secretin-like    GPR1/GPR3/GPR5    GPS   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    GPS (PF01825)   
Domain families : Pfam (NCBI)pfam00002    pfam01825   
Domain families : Smart (EMBL)GPS (SM00303)  
Conserved Domain (NCBI)ADGRG3
DMDM Disease mutations222487
Blocks (Seattle)ADGRG3
SuperfamilyQ86Y34
Human Protein AtlasENSG00000182885
Peptide AtlasQ86Y34
HPRD17073
IPIIPI00384590   IPI01011187   IPI00217510   
Protein Interaction databases
DIP (DOE-UCLA)Q86Y34
IntAct (EBI)Q86Y34
FunCoupENSG00000182885
BioGRIDADGRG3
STRING (EMBL)ADGRG3
ZODIACADGRG3
Ontologies - Pathways
QuickGOQ86Y34
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  B cell differentiation  regulation of cell migration  negative regulation of CREB transcription factor activity  specific granule membrane  neutrophil degranulation  negative regulation of NIK/NF-kappaB signaling  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  B cell differentiation  regulation of cell migration  negative regulation of CREB transcription factor activity  specific granule membrane  neutrophil degranulation  negative regulation of NIK/NF-kappaB signaling  
NDEx NetworkADGRG3
Atlas of Cancer Signalling NetworkADGRG3
Wikipedia pathwaysADGRG3
Orthology - Evolution
OrthoDB222487
GeneTree (enSembl)ENSG00000182885
Phylogenetic Trees/Animal Genes : TreeFamADGRG3
HOVERGENQ86Y34
HOGENOMQ86Y34
Homologs : HomoloGeneADGRG3
Homology/Alignments : Family Browser (UCSC)ADGRG3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADGRG3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADGRG3
dbVarADGRG3
ClinVarADGRG3
1000_GenomesADGRG3 
Exome Variant ServerADGRG3
ExAC (Exome Aggregation Consortium)ADGRG3 (select the gene name)
Genetic variants : HAPMAP222487
Genomic Variants (DGV)ADGRG3 [DGVbeta]
DECIPHERADGRG3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADGRG3 
Mutations
ICGC Data PortalADGRG3 
TCGA Data PortalADGRG3 
Broad Tumor PortalADGRG3
OASIS PortalADGRG3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDADGRG3
BioMutasearch ADGRG3
DgiDB (Drug Gene Interaction Database)ADGRG3
DoCM (Curated mutations)ADGRG3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADGRG3 (select a term)
intoGenADGRG3
Cancer3DADGRG3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenADGRG3
Genetic Testing Registry ADGRG3
NextProtQ86Y34 [Medical]
TSGene222487
GENETestsADGRG3
Target ValidationADGRG3
Huge Navigator ADGRG3 [HugePedia]
snp3D : Map Gene to Disease222487
BioCentury BCIQADGRG3
ClinGenADGRG3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD222487
Chemical/Pharm GKB GenePA28936
Clinical trialADGRG3
Miscellaneous
canSAR (ICR)ADGRG3 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADGRG3
EVEXADGRG3
GoPubMedADGRG3
iHOPADGRG3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:37:34 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.