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ADGRG4 (adhesion G protein-coupled receptor G4)

Identity

Alias_namesGPR112
G protein-coupled receptor 112
Alias_symbol (synonym)RP1-299I16
PGR17
Other alias
HGNC (Hugo) ADGRG4
LocusID (NCBI) 139378
Atlas_Id 77290
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 136300963 and ends at 136416888 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADGRG4   18992
Cards
Entrez_Gene (NCBI)ADGRG4  139378  adhesion G protein-coupled receptor G4
AliasesGPR112; PGR17; RP1-299I16
GeneCards (Weizmann)ADGRG4
Ensembl hg19 (Hinxton)ENSG00000156920 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156920 [Gene_View]  chrX:136300963-136416888 [Contig_View]  ADGRG4 [Vega]
ICGC DataPortalENSG00000156920
TCGA cBioPortalADGRG4
AceView (NCBI)ADGRG4
Genatlas (Paris)ADGRG4
WikiGenes139378
SOURCE (Princeton)ADGRG4
Genetics Home Reference (NIH)ADGRG4
Genomic and cartography
GoldenPath hg38 (UCSC)ADGRG4  -     chrX:136300963-136416888 +  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADGRG4  -     Xq26.3   [Description]    (hg19-Feb_2009)
EnsemblADGRG4 - Xq26.3 [CytoView hg19]  ADGRG4 - Xq26.3 [CytoView hg38]
Mapping of homologs : NCBIADGRG4 [Mapview hg19]  ADGRG4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY140954 AY255581 AY882585 BC156126 CR936801
RefSeq transcript (Entrez)NM_153834
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADGRG4
Cluster EST : UnigeneHs.381354 [ NCBI ]
CGAP (NCI)Hs.381354
Alternative Splicing GalleryENSG00000156920
Gene ExpressionADGRG4 [ NCBI-GEO ]   ADGRG4 [ EBI - ARRAY_EXPRESS ]   ADGRG4 [ SEEK ]   ADGRG4 [ MEM ]
Gene Expression Viewer (FireBrowse)ADGRG4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)139378
GTEX Portal (Tissue expression)ADGRG4
Human Protein AtlasENSG00000156920-ADGRG4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZF6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZF6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZF6
Splice isoforms : SwissVarQ8IZF6
PhosPhoSitePlusQ8IZF6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_2 (PS00650)    G_PROTEIN_RECEP_F2_4 (PS50261)    GPS (PS50221)    PTX_2 (PS51828)   
Domains : Interpro (EBI)ConA-like_dom    GPCR_2-like    GPCR_2_secretin-like    GPCR_2_secretin-like_CS    GPS    Pentraxin-related   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    GPS (PF01825)    Pentaxin (PF00354)   
Domain families : Pfam (NCBI)pfam00002    pfam01825    pfam00354   
Domain families : Smart (EMBL)GPS (SM00303)  PTX (SM00159)  
Conserved Domain (NCBI)ADGRG4
DMDM Disease mutations139378
Blocks (Seattle)ADGRG4
SuperfamilyQ8IZF6
Human Protein Atlas [tissue]ENSG00000156920-ADGRG4 [tissue]
Peptide AtlasQ8IZF6
HPRD06578
IPIIPI00645561   IPI00552840   IPI00853390   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZF6
IntAct (EBI)Q8IZF6
FunCoupENSG00000156920
BioGRIDADGRG4
STRING (EMBL)ADGRG4
ZODIACADGRG4
Ontologies - Pathways
QuickGOQ8IZF6
Ontology : AmiGOG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkADGRG4
Atlas of Cancer Signalling NetworkADGRG4
Wikipedia pathwaysADGRG4
Orthology - Evolution
OrthoDB139378
GeneTree (enSembl)ENSG00000156920
Phylogenetic Trees/Animal Genes : TreeFamADGRG4
HOVERGENQ8IZF6
HOGENOMQ8IZF6
Homologs : HomoloGeneADGRG4
Homology/Alignments : Family Browser (UCSC)ADGRG4
Gene fusions - Rearrangements
Tumor Fusion PortalADGRG4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADGRG4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADGRG4
dbVarADGRG4
ClinVarADGRG4
1000_GenomesADGRG4 
Exome Variant ServerADGRG4
ExAC (Exome Aggregation Consortium)ENSG00000156920
GNOMAD BrowserENSG00000156920
Genetic variants : HAPMAP139378
Genomic Variants (DGV)ADGRG4 [DGVbeta]
DECIPHERADGRG4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADGRG4 
Mutations
ICGC Data PortalADGRG4 
TCGA Data PortalADGRG4 
Broad Tumor PortalADGRG4
OASIS PortalADGRG4 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDADGRG4
BioMutasearch ADGRG4
DgiDB (Drug Gene Interaction Database)ADGRG4
DoCM (Curated mutations)ADGRG4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADGRG4 (select a term)
intoGenADGRG4
Cancer3DADGRG4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETADGRG4
MedgenADGRG4
Genetic Testing Registry ADGRG4
NextProtQ8IZF6 [Medical]
TSGene139378
GENETestsADGRG4
Target ValidationADGRG4
Huge Navigator ADGRG4 [HugePedia]
snp3D : Map Gene to Disease139378
BioCentury BCIQADGRG4
ClinGenADGRG4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD139378
Chemical/Pharm GKB GenePA134885132
Clinical trialADGRG4
Miscellaneous
canSAR (ICR)ADGRG4 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADGRG4
EVEXADGRG4
GoPubMedADGRG4
iHOPADGRG4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:18:02 CET 2017

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