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ADGRG5 (adhesion G protein-coupled receptor G5)

Identity

Alias_namesGPR114
G protein-coupled receptor 114
Alias_symbol (synonym)PGR27
Other alias
HGNC (Hugo) ADGRG5
LocusID (NCBI) 221188
Atlas_Id 77585
Location 16q21  [Link to chromosome band 16q21]
Location_base_pair Starts at 57542637 and ends at 57577188 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
LAMB2 (3p21.31) / ADGRG5 (16q21)OSBPL5 (11p15.4) / ADGRG5 (16q21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADGRG5   19010
Cards
Entrez_Gene (NCBI)ADGRG5  221188  adhesion G protein-coupled receptor G5
AliasesGPR114; PGR27
GeneCards (Weizmann)ADGRG5
Ensembl hg19 (Hinxton)ENSG00000159618 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159618 [Gene_View]  chr16:57542637-57577188 [Contig_View]  ADGRG5 [Vega]
ICGC DataPortalENSG00000159618
TCGA cBioPortalADGRG5
AceView (NCBI)ADGRG5
Genatlas (Paris)ADGRG5
WikiGenes221188
SOURCE (Princeton)ADGRG5
Genetics Home Reference (NIH)ADGRG5
Genomic and cartography
GoldenPath hg38 (UCSC)ADGRG5  -     chr16:57542637-57577188 +  16q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADGRG5  -     16q21   [Description]    (hg19-Feb_2009)
EnsemblADGRG5 - 16q21 [CytoView hg19]  ADGRG5 - 16q21 [CytoView hg38]
Mapping of homologs : NCBIADGRG5 [Mapview hg19]  ADGRG5 [Mapview hg38]
OMIM616965   
Gene and transcription
Genbank (Entrez)AA835742 AK128298 AK160368 AK172765 AK292783
RefSeq transcript (Entrez)NM_001304376 NM_001318481 NM_153837
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADGRG5
Cluster EST : UnigeneHs.187884 [ NCBI ]
CGAP (NCI)Hs.187884
Alternative Splicing GalleryENSG00000159618
Gene ExpressionADGRG5 [ NCBI-GEO ]   ADGRG5 [ EBI - ARRAY_EXPRESS ]   ADGRG5 [ SEEK ]   ADGRG5 [ MEM ]
Gene Expression Viewer (FireBrowse)ADGRG5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)221188
GTEX Portal (Tissue expression)ADGRG5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZF4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZF4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZF4
Splice isoforms : SwissVarQ8IZF4
PhosPhoSitePlusQ8IZF4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F2_4 (PS50261)    GPS (PS50221)   
Domains : Interpro (EBI)GPCR_2-like    GPCR_2_secretin-like    GPR1/GPR3/GPR5    GPS   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    GPS (PF01825)   
Domain families : Pfam (NCBI)pfam00002    pfam01825   
Domain families : Smart (EMBL)GPS (SM00303)  
Conserved Domain (NCBI)ADGRG5
DMDM Disease mutations221188
Blocks (Seattle)ADGRG5
SuperfamilyQ8IZF4
Human Protein AtlasENSG00000159618
Peptide AtlasQ8IZF4
HPRD17056
IPIIPI00217844   IPI00908337   IPI00455018   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZF4
IntAct (EBI)Q8IZF4
FunCoupENSG00000159618
BioGRIDADGRG5
STRING (EMBL)ADGRG5
ZODIACADGRG5
Ontologies - Pathways
QuickGOQ8IZF4
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  
NDEx NetworkADGRG5
Atlas of Cancer Signalling NetworkADGRG5
Wikipedia pathwaysADGRG5
Orthology - Evolution
OrthoDB221188
GeneTree (enSembl)ENSG00000159618
Phylogenetic Trees/Animal Genes : TreeFamADGRG5
HOVERGENQ8IZF4
HOGENOMQ8IZF4
Homologs : HomoloGeneADGRG5
Homology/Alignments : Family Browser (UCSC)ADGRG5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADGRG5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADGRG5
dbVarADGRG5
ClinVarADGRG5
1000_GenomesADGRG5 
Exome Variant ServerADGRG5
ExAC (Exome Aggregation Consortium)ADGRG5 (select the gene name)
Genetic variants : HAPMAP221188
Genomic Variants (DGV)ADGRG5 [DGVbeta]
DECIPHERADGRG5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADGRG5 
Mutations
ICGC Data PortalADGRG5 
TCGA Data PortalADGRG5 
Broad Tumor PortalADGRG5
OASIS PortalADGRG5 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDADGRG5
BioMutasearch ADGRG5
DgiDB (Drug Gene Interaction Database)ADGRG5
DoCM (Curated mutations)ADGRG5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADGRG5 (select a term)
intoGenADGRG5
Cancer3DADGRG5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616965   
Orphanet
MedgenADGRG5
Genetic Testing Registry ADGRG5
NextProtQ8IZF4 [Medical]
TSGene221188
GENETestsADGRG5
Target ValidationADGRG5
Huge Navigator ADGRG5 [HugePedia]
snp3D : Map Gene to Disease221188
BioCentury BCIQADGRG5
ClinGenADGRG5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD221188
Chemical/Pharm GKB GenePA134896363
Clinical trialADGRG5
Miscellaneous
canSAR (ICR)ADGRG5 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADGRG5
EVEXADGRG5
GoPubMedADGRG5
iHOPADGRG5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:37:35 CEST 2017

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