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ADGRL4 (adhesion G protein-coupled receptor L4)

Identity

Alias_namesELTD1
EGF
Alias_symbol (synonym)ETL
Other aliasKPG_003
HGNC (Hugo) ADGRL4
LocusID (NCBI) 64123
Atlas_Id 53620
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 79355449 and ends at 79472495 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADGRL4   20822
Cards
Entrez_Gene (NCBI)ADGRL4  64123  adhesion G protein-coupled receptor L4
AliasesELTD1; ETL; KPG_003
GeneCards (Weizmann)ADGRL4
Ensembl hg19 (Hinxton)ENSG00000162618 [Gene_View]  chr1:79355449-79472495 [Contig_View]  ADGRL4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000162618 [Gene_View]  chr1:79355449-79472495 [Contig_View]  ADGRL4 [Vega]
ICGC DataPortalENSG00000162618
TCGA cBioPortalADGRL4
AceView (NCBI)ADGRL4
Genatlas (Paris)ADGRL4
WikiGenes64123
SOURCE (Princeton)ADGRL4
Genetics Home Reference (NIH)ADGRL4
Genomic and cartography
GoldenPath hg19 (UCSC)ADGRL4  -     chr1:79355449-79472495 -  1p31.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ADGRL4  -     1p31.1   [Description]    (hg38-Dec_2013)
EnsemblADGRL4 - 1p31.1 [CytoView hg19]  ADGRL4 - 1p31.1 [CytoView hg38]
Mapping of homologs : NCBIADGRL4 [Mapview hg19]  ADGRL4 [Mapview hg38]
OMIM616419   
Gene and transcription
Genbank (Entrez)AB032017 AF192403 AK129766 AK172750 AK292894
RefSeq transcript (Entrez)NM_022159
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)ADGRL4
Cluster EST : UnigeneHs.132314 [ NCBI ]
CGAP (NCI)Hs.132314
Alternative Splicing GalleryENSG00000162618
Gene ExpressionADGRL4 [ NCBI-GEO ]   ADGRL4 [ EBI - ARRAY_EXPRESS ]   ADGRL4 [ SEEK ]   ADGRL4 [ MEM ]
Gene Expression Viewer (FireBrowse)ADGRL4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64123
GTEX Portal (Tissue expression)ADGRL4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HBW9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HBW9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HBW9
Splice isoforms : SwissVarQ9HBW9
PhosPhoSitePlusQ9HBW9
Domaine pattern : Prosite (Expaxy)ASX_HYDROXYL (PS00010)    EF_HAND_1 (PS00018)    EGF_2 (PS01186)    EGF_3 (PS50026)    EGF_CA (PS01187)    G_PROTEIN_RECEP_F2_2 (PS00650)    G_PROTEIN_RECEP_F2_4 (PS50261)    GPS (PS50221)   
Domains : Interpro (EBI)EGF-like_Ca-bd_dom    EGF-like_CS    EGF-like_dom    EGF-type_Asp/Asn_hydroxyl_site    EGF_Ca-bd_CS    GAIN_dom_N    GFP-like    GPCR_2-like    GPCR_2_secretin-like    GPCR_2_secretin-like_CS    GPS   
Domain families : Pfam (Sanger)7tm_2 (PF00002)    EGF_CA (PF07645)    GAIN (PF16489)    GPS (PF01825)   
Domain families : Pfam (NCBI)pfam00002    pfam07645    pfam16489    pfam01825   
Domain families : Smart (EMBL)EGF (SM00181)  EGF_CA (SM00179)  GPS (SM00303)  
Conserved Domain (NCBI)ADGRL4
DMDM Disease mutations64123
Blocks (Seattle)ADGRL4
SuperfamilyQ9HBW9
Human Protein AtlasENSG00000162618
Peptide AtlasQ9HBW9
IPIIPI00848229   IPI00374007   
Protein Interaction databases
DIP (DOE-UCLA)Q9HBW9
IntAct (EBI)Q9HBW9
FunCoupENSG00000162618
BioGRIDADGRL4
STRING (EMBL)ADGRL4
ZODIACADGRL4
Ontologies - Pathways
QuickGOQ9HBW9
Ontology : AmiGOG-protein coupled receptor activity  calcium ion binding  plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  cytoplasmic vesicle  protein dimerization activity  
Ontology : EGO-EBIG-protein coupled receptor activity  calcium ion binding  plasma membrane  cell surface receptor signaling pathway  G-protein coupled receptor signaling pathway  integral component of membrane  cytoplasmic vesicle  protein dimerization activity  
NDEx NetworkADGRL4
Atlas of Cancer Signalling NetworkADGRL4
Wikipedia pathwaysADGRL4
Orthology - Evolution
OrthoDB64123
GeneTree (enSembl)ENSG00000162618
Phylogenetic Trees/Animal Genes : TreeFamADGRL4
HOVERGENQ9HBW9
HOGENOMQ9HBW9
Homologs : HomoloGeneADGRL4
Homology/Alignments : Family Browser (UCSC)ADGRL4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADGRL4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADGRL4
dbVarADGRL4
ClinVarADGRL4
1000_GenomesADGRL4 
Exome Variant ServerADGRL4
ExAC (Exome Aggregation Consortium)ADGRL4 (select the gene name)
Genetic variants : HAPMAP64123
Genomic Variants (DGV)ADGRL4 [DGVbeta]
DECIPHER (Syndromes)1:79355449-79472495  ENSG00000162618
CONAN: Copy Number AnalysisADGRL4 
Mutations
ICGC Data PortalADGRL4 
TCGA Data PortalADGRL4 
Broad Tumor PortalADGRL4
OASIS PortalADGRL4 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDADGRL4
BioMutasearch ADGRL4
DgiDB (Drug Gene Interaction Database)ADGRL4
DoCM (Curated mutations)ADGRL4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADGRL4 (select a term)
intoGenADGRL4
Cancer3DADGRL4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616419   
Orphanet
MedgenADGRL4
Genetic Testing Registry ADGRL4
NextProtQ9HBW9 [Medical]
TSGene64123
GENETestsADGRL4
Huge Navigator ADGRL4 [HugePedia]
snp3D : Map Gene to Disease64123
BioCentury BCIQADGRL4
ClinGenADGRL4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64123
Chemical/Pharm GKB GenePA134946418
Clinical trialADGRL4
Miscellaneous
canSAR (ICR)ADGRL4 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADGRL4
EVEXADGRL4
GoPubMedADGRL4
iHOPADGRL4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:51:43 CEST 2017

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