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ADHFE1 (alcohol dehydrogenase, iron containing 1)

Identity

Alias_symbol (synonym)ADHFe1
FLJ32430
Other aliasADH8
HMFT2263
HOT
HGNC (Hugo) ADHFE1
LocusID (NCBI) 137872
Atlas_Id 46902
Location 8q13.1  [Link to chromosome band 8q13]
Location_base_pair Starts at 67344718 and ends at 67381044 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADHFE1   16354
Cards
Entrez_Gene (NCBI)ADHFE1  137872  alcohol dehydrogenase, iron containing 1
AliasesADH8; HMFT2263; HOT
GeneCards (Weizmann)ADHFE1
Ensembl hg19 (Hinxton)ENSG00000147576 [Gene_View]  chr8:67344718-67381044 [Contig_View]  ADHFE1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000147576 [Gene_View]  chr8:67344718-67381044 [Contig_View]  ADHFE1 [Vega]
ICGC DataPortalENSG00000147576
TCGA cBioPortalADHFE1
AceView (NCBI)ADHFE1
Genatlas (Paris)ADHFE1
WikiGenes137872
SOURCE (Princeton)ADHFE1
Genetics Home Reference (NIH)ADHFE1
Genomic and cartography
GoldenPath hg19 (UCSC)ADHFE1  -     chr8:67344718-67381044 +  8q13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ADHFE1  -     8q13.1   [Description]    (hg38-Dec_2013)
EnsemblADHFE1 - 8q13.1 [CytoView hg19]  ADHFE1 - 8q13.1 [CytoView hg38]
Mapping of homologs : NCBIADHFE1 [Mapview hg19]  ADHFE1 [Mapview hg38]
OMIM611083   
Gene and transcription
Genbank (Entrez)AB075879 AK056992 AK293530 AK294114 AK300243
RefSeq transcript (Entrez)NM_144650
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008183 NW_004929339
Consensus coding sequences : CCDS (NCBI)ADHFE1
Cluster EST : UnigeneHs.720023 [ NCBI ]
CGAP (NCI)Hs.720023
Alternative Splicing GalleryENSG00000147576
Gene ExpressionADHFE1 [ NCBI-GEO ]   ADHFE1 [ EBI - ARRAY_EXPRESS ]   ADHFE1 [ SEEK ]   ADHFE1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADHFE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)137872
GTEX Portal (Tissue expression)ADHFE1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IWW8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IWW8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IWW8
Splice isoforms : SwissVarQ8IWW8
Catalytic activity : Enzyme1.1.99.24 [ Enzyme-Expasy ]   1.1.99.241.1.99.24 [ IntEnz-EBI ]   1.1.99.24 [ BRENDA ]   1.1.99.24 [ KEGG ]   
PhosPhoSitePlusQ8IWW8
Domains : Interpro (EBI)ADH_Fe   
Domain families : Pfam (Sanger)Fe-ADH (PF00465)   
Domain families : Pfam (NCBI)pfam00465   
Conserved Domain (NCBI)ADHFE1
DMDM Disease mutations137872
Blocks (Seattle)ADHFE1
SuperfamilyQ8IWW8
Human Protein AtlasENSG00000147576
Peptide AtlasQ8IWW8
HPRD12428
IPIIPI00852925   IPI00217420   IPI00794796   IPI00887149   IPI00853471   IPI00926926   IPI00909899   IPI00926003   IPI00925526   IPI01018294   
Protein Interaction databases
DIP (DOE-UCLA)Q8IWW8
IntAct (EBI)Q8IWW8
FunCoupENSG00000147576
BioGRIDADHFE1
STRING (EMBL)ADHFE1
ZODIACADHFE1
Ontologies - Pathways
QuickGOQ8IWW8
Ontology : AmiGOmitochondrion  mitochondrial matrix  2-oxoglutarate metabolic process  molecular hydrogen transport  metal ion binding  hydroxyacid-oxoacid transhydrogenase activity  hydroxyacid-oxoacid transhydrogenase activity  oxidation-reduction process  
Ontology : EGO-EBImitochondrion  mitochondrial matrix  2-oxoglutarate metabolic process  molecular hydrogen transport  metal ion binding  hydroxyacid-oxoacid transhydrogenase activity  hydroxyacid-oxoacid transhydrogenase activity  oxidation-reduction process  
NDEx NetworkADHFE1
Atlas of Cancer Signalling NetworkADHFE1
Wikipedia pathwaysADHFE1
Orthology - Evolution
OrthoDB137872
GeneTree (enSembl)ENSG00000147576
Phylogenetic Trees/Animal Genes : TreeFamADHFE1
HOVERGENQ8IWW8
HOGENOMQ8IWW8
Homologs : HomoloGeneADHFE1
Homology/Alignments : Family Browser (UCSC)ADHFE1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADHFE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADHFE1
dbVarADHFE1
ClinVarADHFE1
1000_GenomesADHFE1 
Exome Variant ServerADHFE1
ExAC (Exome Aggregation Consortium)ADHFE1 (select the gene name)
Genetic variants : HAPMAP137872
Genomic Variants (DGV)ADHFE1 [DGVbeta]
DECIPHER (Syndromes)8:67344718-67381044  ENSG00000147576
CONAN: Copy Number AnalysisADHFE1 
Mutations
ICGC Data PortalADHFE1 
TCGA Data PortalADHFE1 
Broad Tumor PortalADHFE1
OASIS PortalADHFE1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADHFE1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADHFE1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch ADHFE1
DgiDB (Drug Gene Interaction Database)ADHFE1
DoCM (Curated mutations)ADHFE1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADHFE1 (select a term)
intoGenADHFE1
Cancer3DADHFE1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611083   
Orphanet
MedgenADHFE1
Genetic Testing Registry ADHFE1
NextProtQ8IWW8 [Medical]
TSGene137872
GENETestsADHFE1
Huge Navigator ADHFE1 [HugePedia]
snp3D : Map Gene to Disease137872
BioCentury BCIQADHFE1
ClinGenADHFE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD137872
Chemical/Pharm GKB GenePA134871493
Clinical trialADHFE1
Miscellaneous
canSAR (ICR)ADHFE1 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADHFE1
EVEXADHFE1
GoPubMedADHFE1
iHOPADHFE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:55:04 CET 2017

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