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ADIG (adipogenin)

Identity

Alias_namesadipogenesis associated
Alias_symbol (synonym)MGC39724
SMAF1
RP5-1100H13.2
Other alias
HGNC (Hugo) ADIG
LocusID (NCBI) 149685
Atlas_Id 60161
Location 20q11.23  [Link to chromosome band 20q11]
Location_base_pair Starts at 38581195 and ends at 38588463 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADIG   28606
Cards
Entrez_Gene (NCBI)ADIG  149685  adipogenin
AliasesSMAF1
GeneCards (Weizmann)ADIG
Ensembl hg19 (Hinxton)ENSG00000182035 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182035 [Gene_View]  chr20:38581195-38588463 [Contig_View]  ADIG [Vega]
ICGC DataPortalENSG00000182035
TCGA cBioPortalADIG
AceView (NCBI)ADIG
Genatlas (Paris)ADIG
WikiGenes149685
SOURCE (Princeton)ADIG
Genetics Home Reference (NIH)ADIG
Genomic and cartography
GoldenPath hg38 (UCSC)ADIG  -     chr20:38581195-38588463 +  20q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADIG  -     20q11.23   [Description]    (hg19-Feb_2009)
EnsemblADIG - 20q11.23 [CytoView hg19]  ADIG - 20q11.23 [CytoView hg38]
Mapping of homologs : NCBIADIG [Mapview hg19]  ADIG [Mapview hg38]
OMIM611396   
Gene and transcription
Genbank (Entrez)AA974242 AI990489 BC029594 BC119704 BC119705
RefSeq transcript (Entrez)NM_001018082 NM_174906
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADIG
Cluster EST : UnigeneHs.368028 [ NCBI ]
CGAP (NCI)Hs.368028
Alternative Splicing GalleryENSG00000182035
Gene ExpressionADIG [ NCBI-GEO ]   ADIG [ EBI - ARRAY_EXPRESS ]   ADIG [ SEEK ]   ADIG [ MEM ]
Gene Expression Viewer (FireBrowse)ADIG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)149685
GTEX Portal (Tissue expression)ADIG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0VDE8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0VDE8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0VDE8
Splice isoforms : SwissVarQ0VDE8
PhosPhoSitePlusQ0VDE8
Domains : Interpro (EBI)Adipogenin   
Domain families : Pfam (Sanger)Adipogenin (PF15202)   
Domain families : Pfam (NCBI)pfam15202   
Conserved Domain (NCBI)ADIG
DMDM Disease mutations149685
Blocks (Seattle)ADIG
SuperfamilyQ0VDE8
Human Protein AtlasENSG00000182035
Peptide AtlasQ0VDE8
HPRD18068
IPIIPI00169298   IPI01015025   IPI00984159   
Protein Interaction databases
DIP (DOE-UCLA)Q0VDE8
IntAct (EBI)Q0VDE8
FunCoupENSG00000182035
BioGRIDADIG
STRING (EMBL)ADIG
ZODIACADIG
Ontologies - Pathways
QuickGOQ0VDE8
Ontology : AmiGOnucleus  cytoplasm  spermatogenesis  integral component of membrane  positive regulation of fat cell differentiation  white fat cell differentiation  brown fat cell differentiation  
Ontology : EGO-EBInucleus  cytoplasm  spermatogenesis  integral component of membrane  positive regulation of fat cell differentiation  white fat cell differentiation  brown fat cell differentiation  
NDEx NetworkADIG
Atlas of Cancer Signalling NetworkADIG
Wikipedia pathwaysADIG
Orthology - Evolution
OrthoDB149685
GeneTree (enSembl)ENSG00000182035
Phylogenetic Trees/Animal Genes : TreeFamADIG
HOVERGENQ0VDE8
HOGENOMQ0VDE8
Homologs : HomoloGeneADIG
Homology/Alignments : Family Browser (UCSC)ADIG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADIG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADIG
dbVarADIG
ClinVarADIG
1000_GenomesADIG 
Exome Variant ServerADIG
ExAC (Exome Aggregation Consortium)ADIG (select the gene name)
Genetic variants : HAPMAP149685
Genomic Variants (DGV)ADIG [DGVbeta]
DECIPHERADIG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADIG 
Mutations
ICGC Data PortalADIG 
TCGA Data PortalADIG 
Broad Tumor PortalADIG
OASIS PortalADIG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADIG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADIG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ADIG
DgiDB (Drug Gene Interaction Database)ADIG
DoCM (Curated mutations)ADIG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADIG (select a term)
intoGenADIG
Cancer3DADIG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611396   
Orphanet
MedgenADIG
Genetic Testing Registry ADIG
NextProtQ0VDE8 [Medical]
TSGene149685
GENETestsADIG
Target ValidationADIG
Huge Navigator ADIG [HugePedia]
snp3D : Map Gene to Disease149685
BioCentury BCIQADIG
ClinGenADIG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD149685
Chemical/Pharm GKB GenePA162375689
Clinical trialADIG
Miscellaneous
canSAR (ICR)ADIG (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADIG
EVEXADIG
GoPubMedADIG
iHOPADIG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:37:35 CEST 2017

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