Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ADIPOQ-AS1 (ADIPOQ antisense RNA 1)

Identity

Alias_namesADIPOQ antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ADIPOQ-AS1
LocusID (NCBI) 100874095
Atlas_Id 60162
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 186851887 and ends at 186861368 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADIPOQ-AS1   40648
Cards
Entrez_Gene (NCBI)ADIPOQ-AS1  100874095  ADIPOQ antisense RNA 1
Aliases
GeneCards (Weizmann)ADIPOQ-AS1
Ensembl hg19 (Hinxton)ENSG00000226482 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226482 [Gene_View]  chr3:186851887-186861368 [Contig_View]  ADIPOQ-AS1 [Vega]
ICGC DataPortalENSG00000226482
TCGA cBioPortalADIPOQ-AS1
AceView (NCBI)ADIPOQ-AS1
Genatlas (Paris)ADIPOQ-AS1
WikiGenes100874095
SOURCE (Princeton)ADIPOQ-AS1
Genetics Home Reference (NIH)ADIPOQ-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ADIPOQ-AS1  -     chr3:186851887-186861368 -  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADIPOQ-AS1  -     3q27.3   [Description]    (hg19-Feb_2009)
EnsemblADIPOQ-AS1 - 3q27.3 [CytoView hg19]  ADIPOQ-AS1 - 3q27.3 [CytoView hg38]
Mapping of homologs : NCBIADIPOQ-AS1 [Mapview hg19]  ADIPOQ-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC036509
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADIPOQ-AS1
Cluster EST : UnigeneHs.638968 [ NCBI ]
CGAP (NCI)Hs.638968
Alternative Splicing GalleryENSG00000226482
Gene ExpressionADIPOQ-AS1 [ NCBI-GEO ]   ADIPOQ-AS1 [ EBI - ARRAY_EXPRESS ]   ADIPOQ-AS1 [ SEEK ]   ADIPOQ-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADIPOQ-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874095
GTEX Portal (Tissue expression)ADIPOQ-AS1
Human Protein AtlasENSG00000226482-ADIPOQ-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ADIPOQ-AS1
DMDM Disease mutations100874095
Blocks (Seattle)ADIPOQ-AS1
Human Protein Atlas [tissue]ENSG00000226482-ADIPOQ-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000226482
BioGRIDADIPOQ-AS1
STRING (EMBL)ADIPOQ-AS1
ZODIACADIPOQ-AS1
Ontologies - Pathways
Huge Navigator ADIPOQ-AS1 [HugePedia]
snp3D : Map Gene to Disease100874095
BioCentury BCIQADIPOQ-AS1
ClinGenADIPOQ-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874095
Clinical trialADIPOQ-AS1
Miscellaneous
canSAR (ICR)ADIPOQ-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADIPOQ-AS1
EVEXADIPOQ-AS1
GoPubMedADIPOQ-AS1
iHOPADIPOQ-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:06:56 CET 2017

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