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ADIRF (adipogenesis regulatory factor)

Identity

Alias (NCBI)AFRO
APM2
C10orf116
apM-2
HGNC (Hugo) ADIRF
HGNC Alias symbAPM2
AFRO
HGNC Alias nameadipose specific 2
 adipose most abundant gene transcript 2
 adipogenesis factor rich in obesity
HGNC Previous nameC10orf116
HGNC Previous namechromosome 10 open reading frame 116
LocusID (NCBI) 10974
Atlas_Id 51131
Location 10q23.2  [Link to chromosome band 10q23]
Location_base_pair Starts at 86968482 and ends at 86970915 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ADIRF   24043
Cards
Entrez_Gene (NCBI)ADIRF    adipogenesis regulatory factor
AliasesAFRO; APM2; C10orf116; apM-2
GeneCards (Weizmann)ADIRF
Ensembl hg19 (Hinxton)ENSG00000148671 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148671 [Gene_View]  ENSG00000148671 [Sequence]  chr10:86968482-86970915 [Contig_View]  ADIRF [Vega]
ICGC DataPortalENSG00000148671
TCGA cBioPortalADIRF
AceView (NCBI)ADIRF
Genatlas (Paris)ADIRF
SOURCE (Princeton)ADIRF
Genetics Home Reference (NIH)ADIRF
Genomic and cartography
GoldenPath hg38 (UCSC)ADIRF  -     chr10:86968482-86970915 +  10q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADIRF  -     10q23.2   [Description]    (hg19-Feb_2009)
GoldenPathADIRF - 10q23.2 [CytoView hg19]  ADIRF - 10q23.2 [CytoView hg38]
ImmunoBaseENSG00000148671
Genome Data Viewer NCBIADIRF [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI401530 AK312031 BC004471 BM789611 BM850559
RefSeq transcript (Entrez)NM_006829
Consensus coding sequences : CCDS (NCBI)ADIRF
Gene ExpressionADIRF [ NCBI-GEO ]   ADIRF [ EBI - ARRAY_EXPRESS ]   ADIRF [ SEEK ]   ADIRF [ MEM ]
Gene Expression Viewer (FireBrowse)ADIRF [ Firebrowse - Broad ]
GenevisibleExpression of ADIRF in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10974
GTEX Portal (Tissue expression)ADIRF
Human Protein AtlasENSG00000148671-ADIRF [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15847   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15847  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15847
PhosPhoSitePlusQ15847
Domains : Interpro (EBI)ADIRF   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ADIRF
SuperfamilyQ15847
AlphaFold pdb e-kbQ15847   
Human Protein Atlas [tissue]ENSG00000148671-ADIRF [tissue]
HPRD16575
Protein Interaction databases
DIP (DOE-UCLA)Q15847
IntAct (EBI)Q15847
BioGRIDADIRF
STRING (EMBL)ADIRF
ZODIACADIRF
Ontologies - Pathways
QuickGOQ15847
Ontology : AmiGOmolecular_function  protein binding  nucleus  nucleus  nucleoplasm  cytosol  cell differentiation  positive regulation of fat cell differentiation  positive regulation of fat cell differentiation  positive regulation of transcription by RNA polymerase II  extracellular exosome  cellular response to radiation  cellular response to cisplatin  regulation of response to drug  
Ontology : EGO-EBImolecular_function  protein binding  nucleus  nucleus  nucleoplasm  cytosol  cell differentiation  positive regulation of fat cell differentiation  positive regulation of fat cell differentiation  positive regulation of transcription by RNA polymerase II  extracellular exosome  cellular response to radiation  cellular response to cisplatin  regulation of response to drug  
NDEx NetworkADIRF
Atlas of Cancer Signalling NetworkADIRF
Wikipedia pathwaysADIRF
Orthology - Evolution
OrthoDB10974
GeneTree (enSembl)ENSG00000148671
Phylogenetic Trees/Animal Genes : TreeFamADIRF
Homologs : HomoloGeneADIRF
Homology/Alignments : Family Browser (UCSC)ADIRF
Gene fusions - Rearrangements
Fusion : QuiverADIRF
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADIRF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADIRF
dbVarADIRF
ClinVarADIRF
MonarchADIRF
1000_GenomesADIRF 
Exome Variant ServerADIRF
GNOMAD BrowserENSG00000148671
Varsome BrowserADIRF
ACMGADIRF variants
VarityQ15847
Genomic Variants (DGV)ADIRF [DGVbeta]
DECIPHERADIRF [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADIRF 
Mutations
ICGC Data PortalADIRF 
TCGA Data PortalADIRF 
Broad Tumor PortalADIRF
OASIS PortalADIRF [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADIRF  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DADIRF
Mutations and Diseases : HGMDADIRF
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaADIRF
DgiDB (Drug Gene Interaction Database)ADIRF
DoCM (Curated mutations)ADIRF
CIViC (Clinical Interpretations of Variants in Cancer)ADIRF
Cancer3DADIRF
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETADIRF
MedgenADIRF
Genetic Testing Registry ADIRF
NextProtQ15847 [Medical]
GENETestsADIRF
Target ValidationADIRF
Huge Navigator ADIRF [HugePedia]
ClinGenADIRF
Clinical trials, drugs, therapy
MyCancerGenomeADIRF
Protein Interactions : CTDADIRF
Pharm GKB GenePA134930409
PharosQ15847
Clinical trialADIRF
Miscellaneous
canSAR (ICR)ADIRF
HarmonizomeADIRF
DataMed IndexADIRF
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXADIRF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 14:58:40 CEST 2021

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