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ADO (2-aminoethanethiol (cysteamine) dioxygenase)

Identity

Alias_namesC10orf22
chromosome 10 open reading frame 22
2-aminoethanethiol (cysteamine) dioxygenase
Alias_symbol (synonym)FLJ14547
Other alias
HGNC (Hugo) ADO
LocusID (NCBI) 84890
Atlas_Id 60167
Location 10q21.3  [Link to chromosome band 10q21]
Location_base_pair Starts at 64564516 and ends at 64568239 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ADO (10q21.3) / ADO (10q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADO   23506
Cards
Entrez_Gene (NCBI)ADO  84890  2-aminoethanethiol (cysteamine) dioxygenase
AliasesC10orf22
GeneCards (Weizmann)ADO
Ensembl hg19 (Hinxton)ENSG00000181915 [Gene_View]  chr10:64564516-64568239 [Contig_View]  ADO [Vega]
Ensembl hg38 (Hinxton)ENSG00000181915 [Gene_View]  chr10:64564516-64568239 [Contig_View]  ADO [Vega]
ICGC DataPortalENSG00000181915
TCGA cBioPortalADO
AceView (NCBI)ADO
Genatlas (Paris)ADO
WikiGenes84890
SOURCE (Princeton)ADO
Genetics Home Reference (NIH)ADO
Genomic and cartography
GoldenPath hg19 (UCSC)ADO  -     chr10:64564516-64568239 +  10q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ADO  -     10q21.3   [Description]    (hg38-Dec_2013)
EnsemblADO - 10q21.3 [CytoView hg19]  ADO - 10q21.3 [CytoView hg38]
Mapping of homologs : NCBIADO [Mapview hg19]  ADO [Mapview hg38]
OMIM611392   
Gene and transcription
Genbank (Entrez)AK027453 AK127694 AL049319 BC018660 BC028589
RefSeq transcript (Entrez)NM_032804
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)ADO
Cluster EST : UnigeneHs.99821 [ NCBI ]
CGAP (NCI)Hs.99821
Alternative Splicing GalleryENSG00000181915
Gene ExpressionADO [ NCBI-GEO ]   ADO [ EBI - ARRAY_EXPRESS ]   ADO [ SEEK ]   ADO [ MEM ]
Gene Expression Viewer (FireBrowse)ADO [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84890
GTEX Portal (Tissue expression)ADO
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SZ5
Splice isoforms : SwissVarQ96SZ5
Catalytic activity : Enzyme1.13.11.19 [ Enzyme-Expasy ]   1.13.11.191.13.11.19 [ IntEnz-EBI ]   1.13.11.19 [ BRENDA ]   1.13.11.19 [ KEGG ]   
PhosPhoSitePlusQ96SZ5
Domains : Interpro (EBI)Cysteamine_dioxygenase    RmlC-like_jellyroll    RmlC_Cupin   
Domain families : Pfam (Sanger)DUF1637 (PF07847)   
Domain families : Pfam (NCBI)pfam07847   
Conserved Domain (NCBI)ADO
DMDM Disease mutations84890
Blocks (Seattle)ADO
SuperfamilyQ96SZ5
Human Protein AtlasENSG00000181915
Peptide AtlasQ96SZ5
HPRD12566
IPIIPI00045939   
Protein Interaction databases
DIP (DOE-UCLA)Q96SZ5
IntAct (EBI)Q96SZ5
FunCoupENSG00000181915
BioGRIDADO
STRING (EMBL)ADO
ZODIACADO
Ontologies - Pathways
QuickGOQ96SZ5
Ontology : AmiGOmitochondrion  metal ion binding  cysteamine dioxygenase activity  oxidation-reduction process  
Ontology : EGO-EBImitochondrion  metal ion binding  cysteamine dioxygenase activity  oxidation-reduction process  
Pathways : KEGGTaurine and hypotaurine metabolism   
NDEx NetworkADO
Atlas of Cancer Signalling NetworkADO
Wikipedia pathwaysADO
Orthology - Evolution
OrthoDB84890
GeneTree (enSembl)ENSG00000181915
Phylogenetic Trees/Animal Genes : TreeFamADO
HOVERGENQ96SZ5
HOGENOMQ96SZ5
Homologs : HomoloGeneADO
Homology/Alignments : Family Browser (UCSC)ADO
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADO [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADO
dbVarADO
ClinVarADO
1000_GenomesADO 
Exome Variant ServerADO
ExAC (Exome Aggregation Consortium)ADO (select the gene name)
Genetic variants : HAPMAP84890
Genomic Variants (DGV)ADO [DGVbeta]
DECIPHER (Syndromes)10:64564516-64568239  ENSG00000181915
CONAN: Copy Number AnalysisADO 
Mutations
ICGC Data PortalADO 
TCGA Data PortalADO 
Broad Tumor PortalADO
OASIS PortalADO [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADO  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADO
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ADO
DgiDB (Drug Gene Interaction Database)ADO
DoCM (Curated mutations)ADO (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADO (select a term)
intoGenADO
Cancer3DADO(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611392   
Orphanet
MedgenADO
Genetic Testing Registry ADO
NextProtQ96SZ5 [Medical]
TSGene84890
GENETestsADO
Huge Navigator ADO [HugePedia]
snp3D : Map Gene to Disease84890
BioCentury BCIQADO
ClinGenADO
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84890
Chemical/Pharm GKB GenePA162375713
Clinical trialADO
Miscellaneous
canSAR (ICR)ADO (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADO
EVEXADO
GoPubMedADO
iHOPADO
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:53:49 CET 2017

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