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ADORA2A-AS1 (ADORA2A antisense RNA 1)

Identity

Alias_namesC22orf45
chromosome 22 open reading frame 45
Alias_symbol (synonym)FLJ34651
Other alias
HGNC (Hugo) ADORA2A-AS1
LocusID (NCBI) 646023
Atlas_Id 60168
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 24429210 and ends at 24432430 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADORA2A-AS1   37122
Cards
Entrez_Gene (NCBI)ADORA2A-AS1  646023  ADORA2A antisense RNA 1
AliasesC22orf45
GeneCards (Weizmann)ADORA2A-AS1
Ensembl hg19 (Hinxton)ENSG00000178803 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178803 [Gene_View]  chr22:24429210-24432430 [Contig_View]  ADORA2A-AS1 [Vega]
ICGC DataPortalENSG00000178803
TCGA cBioPortalADORA2A-AS1
AceView (NCBI)ADORA2A-AS1
Genatlas (Paris)ADORA2A-AS1
WikiGenes646023
SOURCE (Princeton)ADORA2A-AS1
Genetics Home Reference (NIH)ADORA2A-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ADORA2A-AS1  -     chr22:24429210-24432430 -  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADORA2A-AS1  -     22q11.23   [Description]    (hg19-Feb_2009)
EnsemblADORA2A-AS1 - 22q11.23 [CytoView hg19]  ADORA2A-AS1 - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBIADORA2A-AS1 [Mapview hg19]  ADORA2A-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091970 BC045098 BF509218 DA917327 DB449907
RefSeq transcript (Entrez)NM_001039784
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADORA2A-AS1
Cluster EST : UnigeneHs.632761 [ NCBI ]
CGAP (NCI)Hs.632761
Alternative Splicing GalleryENSG00000178803
Gene ExpressionADORA2A-AS1 [ NCBI-GEO ]   ADORA2A-AS1 [ EBI - ARRAY_EXPRESS ]   ADORA2A-AS1 [ SEEK ]   ADORA2A-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADORA2A-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646023
GTEX Portal (Tissue expression)ADORA2A-AS1
Human Protein AtlasENSG00000178803-ADORA2A-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP86434   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP86434  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP86434
Splice isoforms : SwissVarP86434
PhosPhoSitePlusP86434
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ADORA2A-AS1
DMDM Disease mutations646023
Blocks (Seattle)ADORA2A-AS1
SuperfamilyP86434
Human Protein Atlas [tissue]ENSG00000178803-ADORA2A-AS1 [tissue]
Peptide AtlasP86434
IPIIPI00168153   
Protein Interaction databases
DIP (DOE-UCLA)P86434
IntAct (EBI)P86434
FunCoupENSG00000178803
BioGRIDADORA2A-AS1
STRING (EMBL)ADORA2A-AS1
ZODIACADORA2A-AS1
Ontologies - Pathways
QuickGOP86434
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkADORA2A-AS1
Atlas of Cancer Signalling NetworkADORA2A-AS1
Wikipedia pathwaysADORA2A-AS1
Orthology - Evolution
OrthoDB646023
GeneTree (enSembl)ENSG00000178803
Phylogenetic Trees/Animal Genes : TreeFamADORA2A-AS1
HOVERGENP86434
HOGENOMP86434
Homologs : HomoloGeneADORA2A-AS1
Homology/Alignments : Family Browser (UCSC)ADORA2A-AS1
Gene fusions - Rearrangements
Tumor Fusion PortalADORA2A-AS1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADORA2A-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADORA2A-AS1
dbVarADORA2A-AS1
ClinVarADORA2A-AS1
1000_GenomesADORA2A-AS1 
Exome Variant ServerADORA2A-AS1
ExAC (Exome Aggregation Consortium)ENSG00000178803
GNOMAD BrowserENSG00000178803
Genetic variants : HAPMAP646023
Genomic Variants (DGV)ADORA2A-AS1 [DGVbeta]
DECIPHERADORA2A-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADORA2A-AS1 
Mutations
ICGC Data PortalADORA2A-AS1 
TCGA Data PortalADORA2A-AS1 
Broad Tumor PortalADORA2A-AS1
OASIS PortalADORA2A-AS1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADORA2A-AS1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADORA2A-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ADORA2A-AS1
DgiDB (Drug Gene Interaction Database)ADORA2A-AS1
DoCM (Curated mutations)ADORA2A-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADORA2A-AS1 (select a term)
intoGenADORA2A-AS1
Cancer3DADORA2A-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETADORA2A-AS1
MedgenADORA2A-AS1
Genetic Testing Registry ADORA2A-AS1
NextProtP86434 [Medical]
TSGene646023
GENETestsADORA2A-AS1
Target ValidationADORA2A-AS1
Huge Navigator ADORA2A-AS1 [HugePedia]
snp3D : Map Gene to Disease646023
BioCentury BCIQADORA2A-AS1
ClinGenADORA2A-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646023
Chemical/Pharm GKB GenePA165378332
Clinical trialADORA2A-AS1
Miscellaneous
canSAR (ICR)ADORA2A-AS1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADORA2A-AS1
EVEXADORA2A-AS1
GoPubMedADORA2A-AS1
iHOPADORA2A-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:43:23 CET 2017

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