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ADPRH (ADP-ribosylarginine hydrolase)

Identity

Alias_symbol (synonym)ARH1
Other alias
HGNC (Hugo) ADPRH
LocusID (NCBI) 141
Atlas_Id 45831
Location 3q13.33  [Link to chromosome band 3q13]
Location_base_pair Starts at 119298280 and ends at 119308792 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADPRH   269
Cards
Entrez_Gene (NCBI)ADPRH  141  ADP-ribosylarginine hydrolase
AliasesARH1
GeneCards (Weizmann)ADPRH
Ensembl hg19 (Hinxton)ENSG00000144843 [Gene_View]  chr3:119298280-119308792 [Contig_View]  ADPRH [Vega]
Ensembl hg38 (Hinxton)ENSG00000144843 [Gene_View]  chr3:119298280-119308792 [Contig_View]  ADPRH [Vega]
ICGC DataPortalENSG00000144843
TCGA cBioPortalADPRH
AceView (NCBI)ADPRH
Genatlas (Paris)ADPRH
WikiGenes141
SOURCE (Princeton)ADPRH
Genetics Home Reference (NIH)ADPRH
Genomic and cartography
GoldenPath hg19 (UCSC)ADPRH  -     chr3:119298280-119308792 +  3q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ADPRH  -     3q13.33   [Description]    (hg38-Dec_2013)
EnsemblADPRH - 3q13.33 [CytoView hg19]  ADPRH - 3q13.33 [CytoView hg38]
Mapping of homologs : NCBIADPRH [Mapview hg19]  ADPRH [Mapview hg38]
OMIM603081   
Gene and transcription
Genbank (Entrez)AK291787 AK304560 AK313369 BC020574 BC063883
RefSeq transcript (Entrez)NM_001125 NM_001291949 NM_001291950
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)ADPRH
Cluster EST : UnigeneHs.99884 [ NCBI ]
CGAP (NCI)Hs.99884
Alternative Splicing GalleryENSG00000144843
Gene ExpressionADPRH [ NCBI-GEO ]   ADPRH [ EBI - ARRAY_EXPRESS ]   ADPRH [ SEEK ]   ADPRH [ MEM ]
Gene Expression Viewer (FireBrowse)ADPRH [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)141
GTEX Portal (Tissue expression)ADPRH
Protein : pattern, domain, 3D structure
UniProt/SwissProtP54922   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP54922  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP54922
Splice isoforms : SwissVarP54922
Catalytic activity : Enzyme3.2.2.19 [ Enzyme-Expasy ]   3.2.2.193.2.2.19 [ IntEnz-EBI ]   3.2.2.19 [ BRENDA ]   3.2.2.19 [ KEGG ]   
PhosPhoSitePlusP54922
Domains : Interpro (EBI)ADP-ribosylarg_hydro    Ribosyl_crysJ1   
Domain families : Pfam (Sanger)ADP_ribosyl_GH (PF03747)   
Domain families : Pfam (NCBI)pfam03747   
Conserved Domain (NCBI)ADPRH
DMDM Disease mutations141
Blocks (Seattle)ADPRH
PDB (SRS)3HFW   
PDB (PDBSum)3HFW   
PDB (IMB)3HFW   
PDB (RSDB)3HFW   
Structural Biology KnowledgeBase3HFW   
SCOP (Structural Classification of Proteins)3HFW   
CATH (Classification of proteins structures)3HFW   
SuperfamilyP54922
Human Protein AtlasENSG00000144843
Peptide AtlasP54922
HPRD04359
IPIIPI00009258   IPI00947460   
Protein Interaction databases
DIP (DOE-UCLA)P54922
IntAct (EBI)P54922
FunCoupENSG00000144843
BioGRIDADPRH
STRING (EMBL)ADPRH
ZODIACADPRH
Ontologies - Pathways
QuickGOP54922
Ontology : AmiGOmagnesium ion binding  ADP-ribosylarginine hydrolase activity  GTPase activator activity  protein binding  intracellular  cellular protein modification process  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  protein de-ADP-ribosylation  activation of GTPase activity  
Ontology : EGO-EBImagnesium ion binding  ADP-ribosylarginine hydrolase activity  GTPase activator activity  protein binding  intracellular  cellular protein modification process  intracellular protein transport  endomembrane system  Rab GTPase binding  regulation of vesicle fusion  protein de-ADP-ribosylation  activation of GTPase activity  
NDEx NetworkADPRH
Atlas of Cancer Signalling NetworkADPRH
Wikipedia pathwaysADPRH
Orthology - Evolution
OrthoDB141
GeneTree (enSembl)ENSG00000144843
Phylogenetic Trees/Animal Genes : TreeFamADPRH
HOVERGENP54922
HOGENOMP54922
Homologs : HomoloGeneADPRH
Homology/Alignments : Family Browser (UCSC)ADPRH
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADPRH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADPRH
dbVarADPRH
ClinVarADPRH
1000_GenomesADPRH 
Exome Variant ServerADPRH
ExAC (Exome Aggregation Consortium)ADPRH (select the gene name)
Genetic variants : HAPMAP141
Genomic Variants (DGV)ADPRH [DGVbeta]
DECIPHER (Syndromes)3:119298280-119308792  ENSG00000144843
CONAN: Copy Number AnalysisADPRH 
Mutations
ICGC Data PortalADPRH 
TCGA Data PortalADPRH 
Broad Tumor PortalADPRH
OASIS PortalADPRH [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADPRH  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADPRH
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ADPRH
DgiDB (Drug Gene Interaction Database)ADPRH
DoCM (Curated mutations)ADPRH (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADPRH (select a term)
intoGenADPRH
Cancer3DADPRH(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603081   
Orphanet
MedgenADPRH
Genetic Testing Registry ADPRH
NextProtP54922 [Medical]
TSGene141
GENETestsADPRH
Huge Navigator ADPRH [HugePedia]
snp3D : Map Gene to Disease141
BioCentury BCIQADPRH
ClinGenADPRH
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD141
Chemical/Pharm GKB GenePA24590
Clinical trialADPRH
Miscellaneous
canSAR (ICR)ADPRH (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADPRH
EVEXADPRH
GoPubMedADPRH
iHOPADPRH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 14:51:47 CEST 2017

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