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ADPRS (ADP-ribosylserine hydrolase)

Identity

Alias (NCBI)ADPRHL2
ARH3
CONDSIAS
HGNC (Hugo) ADPRS
HGNC Alias symbARH3
FLJ20446
HGNC Alias nameADP-ribosylarginine hydrolase like 2
LocusID (NCBI) 54936
Atlas_Id 57887
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 36088892 and ends at 36093932 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)ADPRS   21304
Cards
Entrez_Gene (NCBI)ADPRS  54936  ADP-ribosylserine hydrolase
AliasesADPRHL2; ARH3; CONDSIAS
GeneCards (Weizmann)ADPRS
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:36088892-36093932 [Contig_View]  ADPRS [Vega]
TCGA cBioPortalADPRS
AceView (NCBI)ADPRS
Genatlas (Paris)ADPRS
WikiGenes54936
SOURCE (Princeton)ADPRS
Genetics Home Reference (NIH)ADPRS
Genomic and cartography
GoldenPath hg38 (UCSC)ADPRS  -     chr1:36088892-36093932 +  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADPRS  -     -   [Description]    (hg19-Feb_2009)
GoldenPathADPRS - - [CytoView hg19]  ADPRS - - [CytoView hg38]
genome Data Viewer NCBIADPRS [Mapview hg19]  
OMIM610624   618170   
Gene and transcription
Genbank (Entrez)AF212236 AJ427295 AK000453 AK223037 AK295283
RefSeq transcript (Entrez)NM_017825
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADPRS
Gene ExpressionADPRS [ NCBI-GEO ]   ADPRS [ EBI - ARRAY_EXPRESS ]   ADPRS [ SEEK ]   ADPRS [ MEM ]
Gene Expression Viewer (FireBrowse)ADPRS [ Firebrowse - Broad ]
GenevisibleExpression of ADPRS in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54936
GTEX Portal (Tissue expression)ADPRS
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NX46   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NX46  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NX46
Splice isoforms : SwissVarQ9NX46
PhosPhoSitePlusQ9NX46
Domains : Interpro (EBI)Ribosyl_crysJ1    Ribosyl_crysJ1_sf   
Domain families : Pfam (Sanger)ADP_ribosyl_GH (PF03747)   
Domain families : Pfam (NCBI)pfam03747   
Conserved Domain (NCBI)ADPRS
DMDM Disease mutations54936
Blocks (Seattle)ADPRS
PDB (RSDB)2FOZ    2FP0    2G4K    5ZQY    6D36    6D3A   
PDB Europe2FOZ    2FP0    2G4K    5ZQY    6D36    6D3A   
PDB (PDBSum)2FOZ    2FP0    2G4K    5ZQY    6D36    6D3A   
PDB (IMB)2FOZ    2FP0    2G4K    5ZQY    6D36    6D3A   
Structural Biology KnowledgeBase2FOZ    2FP0    2G4K    5ZQY    6D36    6D3A   
SCOP (Structural Classification of Proteins)2FOZ    2FP0    2G4K    5ZQY    6D36    6D3A   
CATH (Classification of proteins structures)2FOZ    2FP0    2G4K    5ZQY    6D36    6D3A   
SuperfamilyQ9NX46
Peptide AtlasQ9NX46
IPIIPI00015865   IPI01013974   IPI01012710   
Protein Interaction databases
DIP (DOE-UCLA)Q9NX46
IntAct (EBI)Q9NX46
BioGRIDADPRS
STRING (EMBL)ADPRS
ZODIACADPRS
Ontologies - Pathways
QuickGOQ9NX46
Ontology : AmiGOmagnesium ion binding  hydrolase activity, hydrolyzing O-glycosyl compounds  poly(ADP-ribose) glycohydrolase activity  poly(ADP-ribose) glycohydrolase activity  nucleus  nucleus  nucleoplasm  mitochondrion  mitochondrial matrix  DNA repair  nuclear body  O-acetyl-ADP-ribose deacetylase activity  cellular response to superoxide  site of DNA damage  
Ontology : EGO-EBImagnesium ion binding  hydrolase activity, hydrolyzing O-glycosyl compounds  poly(ADP-ribose) glycohydrolase activity  poly(ADP-ribose) glycohydrolase activity  nucleus  nucleus  nucleoplasm  mitochondrion  mitochondrial matrix  DNA repair  nuclear body  O-acetyl-ADP-ribose deacetylase activity  cellular response to superoxide  site of DNA damage  
NDEx NetworkADPRS
Atlas of Cancer Signalling NetworkADPRS
Wikipedia pathwaysADPRS
Orthology - Evolution
OrthoDB54936
Phylogenetic Trees/Animal Genes : TreeFamADPRS
HOGENOMQ9NX46
Homologs : HomoloGeneADPRS
Homology/Alignments : Family Browser (UCSC)ADPRS
Gene fusions - Rearrangements
Fusion : QuiverADPRS
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADPRS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADPRS
dbVarADPRS
ClinVarADPRS
MonarchADPRS
1000_GenomesADPRS 
Exome Variant ServerADPRS
Varsome BrowserADPRS
Genetic variants : HAPMAP54936
Genomic Variants (DGV)ADPRS [DGVbeta]
DECIPHERADPRS [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADPRS 
Mutations
ICGC Data PortalADPRS 
TCGA Data PortalADPRS 
Broad Tumor PortalADPRS
OASIS PortalADPRS [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDADPRS
BioMutasearch ADPRS
DgiDB (Drug Gene Interaction Database)ADPRS
DoCM (Curated mutations)ADPRS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADPRS (select a term)
intoGenADPRS
Cancer3DADPRS(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610624    618170   
Orphanet
DisGeNETADPRS
MedgenADPRS
Genetic Testing Registry ADPRS
NextProtQ9NX46 [Medical]
TSGene54936
GENETestsADPRS
Target ValidationADPRS
Huge Navigator ADPRS [HugePedia]
snp3D : Map Gene to Disease54936
BioCentury BCIQADPRS
ClinGenADPRS
Clinical trials, drugs, therapy
Protein Interactions : CTD54936
Clinical trialADPRS
Miscellaneous
canSAR (ICR)ADPRS (select the gene name)
HarmonizomeADPRS
DataMed IndexADPRS
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADPRS
EVEXADPRS
GoPubMedADPRS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 14 14:00:44 CEST 2020

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