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ADRM1 (adhesion regulating molecule 1)

Identity

Alias_symbol (synonym)GP110
Rpn13
ARM1
Other aliasARM-1
HGNC (Hugo) ADRM1
LocusID (NCBI) 11047
Atlas_Id 591
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 62302896 and ends at 62308862 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ADRM1 (20q13.33) / VEPH1 (3q25.31)DPP9 (19p13.3) / ADRM1 (20q13.33)SLCO4A1 (20q13.33) / ADRM1 (20q13.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ADRM1   15759
Cards
Entrez_Gene (NCBI)ADRM1  11047  adhesion regulating molecule 1
AliasesARM-1; ARM1; GP110
GeneCards (Weizmann)ADRM1
Ensembl hg19 (Hinxton)ENSG00000130706 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130706 [Gene_View]  chr20:62302896-62308862 [Contig_View]  ADRM1 [Vega]
ICGC DataPortalENSG00000130706
TCGA cBioPortalADRM1
AceView (NCBI)ADRM1
Genatlas (Paris)ADRM1
WikiGenes11047
SOURCE (Princeton)ADRM1
Genetics Home Reference (NIH)ADRM1
Genomic and cartography
GoldenPath hg38 (UCSC)ADRM1  -     chr20:62302896-62308862 +  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADRM1  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblADRM1 - 20q13.33 [CytoView hg19]  ADRM1 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBIADRM1 [Mapview hg19]  ADRM1 [Mapview hg38]
OMIM610650   
Gene and transcription
Genbank (Entrez)AK054985 AK297567 AK307459 AL558522 BC003059
RefSeq transcript (Entrez)NM_001281437 NM_001281438 NM_007002 NM_175573
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADRM1
Cluster EST : UnigeneHs.90107 [ NCBI ]
CGAP (NCI)Hs.90107
Alternative Splicing GalleryENSG00000130706
Gene ExpressionADRM1 [ NCBI-GEO ]   ADRM1 [ EBI - ARRAY_EXPRESS ]   ADRM1 [ SEEK ]   ADRM1 [ MEM ]
Gene Expression Viewer (FireBrowse)ADRM1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11047
GTEX Portal (Tissue expression)ADRM1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16186   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16186  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16186
Splice isoforms : SwissVarQ16186
PhosPhoSitePlusQ16186
Domains : Interpro (EBI)26S_Psome_Ubiquitin-recp_Rpn13    RPN13_C   
Domain families : Pfam (Sanger)Proteasom_Rpn13 (PF04683)    RPN13_C (PF16550)   
Domain families : Pfam (NCBI)pfam04683    pfam16550   
Conserved Domain (NCBI)ADRM1
DMDM Disease mutations11047
Blocks (Seattle)ADRM1
PDB (SRS)2KQZ    2KR0    2L5V    2MKZ    2NBV    4UEL    4UEM    4WLQ    4WLR    5IRS   
PDB (PDBSum)2KQZ    2KR0    2L5V    2MKZ    2NBV    4UEL    4UEM    4WLQ    4WLR    5IRS   
PDB (IMB)2KQZ    2KR0    2L5V    2MKZ    2NBV    4UEL    4UEM    4WLQ    4WLR    5IRS   
PDB (RSDB)2KQZ    2KR0    2L5V    2MKZ    2NBV    4UEL    4UEM    4WLQ    4WLR    5IRS   
Structural Biology KnowledgeBase2KQZ    2KR0    2L5V    2MKZ    2NBV    4UEL    4UEM    4WLQ    4WLR    5IRS   
SCOP (Structural Classification of Proteins)2KQZ    2KR0    2L5V    2MKZ    2NBV    4UEL    4UEM    4WLQ    4WLR    5IRS   
CATH (Classification of proteins structures)2KQZ    2KR0    2L5V    2MKZ    2NBV    4UEL    4UEM    4WLQ    4WLR    5IRS   
SuperfamilyQ16186
Human Protein AtlasENSG00000130706
Peptide AtlasQ16186
HPRD06440
IPIIPI00033030   IPI00470921   
Protein Interaction databases
DIP (DOE-UCLA)Q16186
IntAct (EBI)Q16186
FunCoupENSG00000130706
BioGRIDADRM1
STRING (EMBL)ADRM1
ZODIACADRM1
Ontologies - Pathways
QuickGOQ16186
Ontology : AmiGOproteasome complex  protease binding  protein binding  nucleoplasm  cytosol  cytosol  plasma membrane  integral component of plasma membrane  transcription elongation from RNA polymerase II promoter  ubiquitin-dependent protein catabolic process  proteasome regulatory particle, lid subcomplex  positive regulation of endopeptidase activity  membrane  protein deubiquitination  ubiquitin binding  proteasome assembly  endopeptidase activator activity  proteasome binding  
Ontology : EGO-EBIproteasome complex  protease binding  protein binding  nucleoplasm  cytosol  cytosol  plasma membrane  integral component of plasma membrane  transcription elongation from RNA polymerase II promoter  ubiquitin-dependent protein catabolic process  proteasome regulatory particle, lid subcomplex  positive regulation of endopeptidase activity  membrane  protein deubiquitination  ubiquitin binding  proteasome assembly  endopeptidase activator activity  proteasome binding  
NDEx NetworkADRM1
Atlas of Cancer Signalling NetworkADRM1
Wikipedia pathwaysADRM1
Orthology - Evolution
OrthoDB11047
GeneTree (enSembl)ENSG00000130706
Phylogenetic Trees/Animal Genes : TreeFamADRM1
HOVERGENQ16186
HOGENOMQ16186
Homologs : HomoloGeneADRM1
Homology/Alignments : Family Browser (UCSC)ADRM1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADRM1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADRM1
dbVarADRM1
ClinVarADRM1
1000_GenomesADRM1 
Exome Variant ServerADRM1
ExAC (Exome Aggregation Consortium)ADRM1 (select the gene name)
Genetic variants : HAPMAP11047
Genomic Variants (DGV)ADRM1 [DGVbeta]
DECIPHERADRM1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADRM1 
Mutations
ICGC Data PortalADRM1 
TCGA Data PortalADRM1 
Broad Tumor PortalADRM1
OASIS PortalADRM1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADRM1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADRM1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ADRM1
DgiDB (Drug Gene Interaction Database)ADRM1
DoCM (Curated mutations)ADRM1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADRM1 (select a term)
intoGenADRM1
Cancer3DADRM1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610650   
Orphanet
MedgenADRM1
Genetic Testing Registry ADRM1
NextProtQ16186 [Medical]
TSGene11047
GENETestsADRM1
Target ValidationADRM1
Huge Navigator ADRM1 [HugePedia]
snp3D : Map Gene to Disease11047
BioCentury BCIQADRM1
ClinGenADRM1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11047
Chemical/Pharm GKB GenePA24599
Clinical trialADRM1
Miscellaneous
canSAR (ICR)ADRM1 (select the gene name)
Probes
Litterature
PubMed71 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADRM1
EVEXADRM1
GoPubMedADRM1
iHOPADRM1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 18:56:30 CEST 2017

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