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ADTRP (androgen dependent TFPI regulating protein)

Identity

Alias_namesC6orf105
chromosome 6 open reading frame 105
androgen-dependent TFPI-regulating protein
Alias_symbol (synonym)dJ413H6.1
AIG1L
Other alias
HGNC (Hugo) ADTRP
LocusID (NCBI) 84830
Atlas_Id 60177
Location 6p24.1  [Link to chromosome band 6p24]
Location_base_pair Starts at 11713655 and ends at 11779047 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
WBP1L (10q24.32) / ADTRP (6p24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(6;10)(p24;q24) WBP1L/ADTRP


External links

Nomenclature
HGNC (Hugo)ADTRP   21214
Cards
Entrez_Gene (NCBI)ADTRP  84830  androgen dependent TFPI regulating protein
AliasesAIG1L; C6orf105; dJ413H6.1
GeneCards (Weizmann)ADTRP
Ensembl hg19 (Hinxton)ENSG00000111863 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111863 [Gene_View]  ENSG00000111863 [Sequence]  chr6:11713655-11779047 [Contig_View]  ADTRP [Vega]
ICGC DataPortalENSG00000111863
TCGA cBioPortalADTRP
AceView (NCBI)ADTRP
Genatlas (Paris)ADTRP
WikiGenes84830
SOURCE (Princeton)ADTRP
Genetics Home Reference (NIH)ADTRP
Genomic and cartography
GoldenPath hg38 (UCSC)ADTRP  -     chr6:11713655-11779047 -  6p24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ADTRP  -     6p24.1   [Description]    (hg19-Feb_2009)
EnsemblADTRP - 6p24.1 [CytoView hg19]  ADTRP - 6p24.1 [CytoView hg38]
Mapping of homologs : NCBIADTRP [Mapview hg19]  ADTRP [Mapview hg38]
OMIM614348   
Gene and transcription
Genbank (Entrez)AI147084 AI336841 AJ420520 AK123258 AK300919
RefSeq transcript (Entrez)NM_001143948 NM_032744
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ADTRP
Cluster EST : UnigeneHs.126409 [ NCBI ]
CGAP (NCI)Hs.126409
Alternative Splicing GalleryENSG00000111863
Gene ExpressionADTRP [ NCBI-GEO ]   ADTRP [ EBI - ARRAY_EXPRESS ]   ADTRP [ SEEK ]   ADTRP [ MEM ]
Gene Expression Viewer (FireBrowse)ADTRP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84830
GTEX Portal (Tissue expression)ADTRP
Human Protein AtlasENSG00000111863-ADTRP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IZ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IZ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IZ2
Splice isoforms : SwissVarQ96IZ2
PhosPhoSitePlusQ96IZ2
Domains : Interpro (EBI)Far-17a_AIG1   
Domain families : Pfam (Sanger)Far-17a_AIG1 (PF04750)   
Domain families : Pfam (NCBI)pfam04750   
Conserved Domain (NCBI)ADTRP
DMDM Disease mutations84830
Blocks (Seattle)ADTRP
SuperfamilyQ96IZ2
Human Protein Atlas [tissue]ENSG00000111863-ADTRP [tissue]
Peptide AtlasQ96IZ2
HPRD12836
IPIIPI00067155   IPI00965560   IPI00644111   IPI00921292   IPI00964085   IPI00964382   IPI00964866   
Protein Interaction databases
DIP (DOE-UCLA)Q96IZ2
IntAct (EBI)Q96IZ2
FunCoupENSG00000111863
BioGRIDADTRP
STRING (EMBL)ADTRP
ZODIACADTRP
Ontologies - Pathways
QuickGOQ96IZ2
Ontology : AmiGOplasma membrane  integral component of membrane  
Ontology : EGO-EBIplasma membrane  integral component of membrane  
NDEx NetworkADTRP
Atlas of Cancer Signalling NetworkADTRP
Wikipedia pathwaysADTRP
Orthology - Evolution
OrthoDB84830
GeneTree (enSembl)ENSG00000111863
Phylogenetic Trees/Animal Genes : TreeFamADTRP
HOVERGENQ96IZ2
HOGENOMQ96IZ2
Homologs : HomoloGeneADTRP
Homology/Alignments : Family Browser (UCSC)ADTRP
Gene fusions - Rearrangements
Fusion : QuiverADTRP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerADTRP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ADTRP
dbVarADTRP
ClinVarADTRP
1000_GenomesADTRP 
Exome Variant ServerADTRP
ExAC (Exome Aggregation Consortium)ENSG00000111863
GNOMAD BrowserENSG00000111863
Varsome BrowserADTRP
Genetic variants : HAPMAP84830
Genomic Variants (DGV)ADTRP [DGVbeta]
DECIPHERADTRP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisADTRP 
Mutations
ICGC Data PortalADTRP 
TCGA Data PortalADTRP 
Broad Tumor PortalADTRP
OASIS PortalADTRP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICADTRP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDADTRP
BioMutasearch ADTRP
DgiDB (Drug Gene Interaction Database)ADTRP
DoCM (Curated mutations)ADTRP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ADTRP (select a term)
intoGenADTRP
Cancer3DADTRP(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614348   
Orphanet
DisGeNETADTRP
MedgenADTRP
Genetic Testing Registry ADTRP
NextProtQ96IZ2 [Medical]
TSGene84830
GENETestsADTRP
Target ValidationADTRP
Huge Navigator ADTRP [HugePedia]
snp3D : Map Gene to Disease84830
BioCentury BCIQADTRP
ClinGenADTRP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84830
Chemical/Pharm GKB GenePA134981312
Clinical trialADTRP
Miscellaneous
canSAR (ICR)ADTRP (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineADTRP
EVEXADTRP
GoPubMedADTRP
iHOPADTRP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 13:34:51 CEST 2018

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