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AFF2 (AF4/FMR2 family member 2)

Identity

Alias (NCBI)FMR2
FMR2P
FRAXE
MRX2
OX19
XLID109
HGNC (Hugo) AFF2
HGNC Alias symbFRAXE
HGNC Previous nameFMR2
HGNC Previous namefragile X mental retardation 2
 AF4/FMR2 family, member 2
LocusID (NCBI) 2334
Atlas_Id 60180
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 148500617 and ends at 149000663 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AFF2 (Xq28)::AFF2 (Xq28)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)AFF2   3776
Cards
Entrez_Gene (NCBI)AFF2    AF4/FMR2 family member 2
AliasesFMR2; FMR2P; FRAXE; MRX2; 
OX19; XLID109
GeneCards (Weizmann)AFF2
Ensembl hg19 (Hinxton)ENSG00000155966 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155966 [Gene_View]  ENSG00000155966 [Sequence]  chrX:148500617-149000663 [Contig_View]  AFF2 [Vega]
ICGC DataPortalENSG00000155966
TCGA cBioPortalAFF2
AceView (NCBI)AFF2
Genatlas (Paris)AFF2
SOURCE (Princeton)AFF2
Genetics Home Reference (NIH)AFF2
Genomic and cartography
GoldenPath hg38 (UCSC)AFF2  -     chrX:148500617-149000663 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AFF2  -     Xq28   [Description]    (hg19-Feb_2009)
GoldenPathAFF2 - Xq28 [CytoView hg19]  AFF2 - Xq28 [CytoView hg38]
ImmunoBaseENSG00000155966
Genome Data Viewer NCBIAFF2 [Mapview hg19]  
OMIM300806   309548   
Gene and transcription
Genbank (Entrez)AB102644 AJ001550 AK301927 AK311467 BC132683
RefSeq transcript (Entrez)NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_001170628 NM_002025
Consensus coding sequences : CCDS (NCBI)AFF2
Gene ExpressionAFF2 [ NCBI-GEO ]   AFF2 [ EBI - ARRAY_EXPRESS ]   AFF2 [ SEEK ]   AFF2 [ MEM ]
Gene Expression Viewer (FireBrowse)AFF2 [ Firebrowse - Broad ]
GenevisibleExpression of AFF2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2334
GTEX Portal (Tissue expression)AFF2
Human Protein AtlasENSG00000155966-AFF2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AFF2
Human Protein Atlas [tissue]ENSG00000155966-AFF2 [tissue]
HPRD02397
Protein Interaction databases
BioGRIDAFF2
STRING (EMBL)AFF2
ZODIACAFF2
Ontologies - Pathways
Litterature
PubMed46 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXAFF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 13:10:12 CET 2022

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