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AFG3L1P (AFG3-like AAA ATPase 1, pseudogene)

Identity

Alias_namesAFG3
AFG3L1
AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene
AFG3 like AAA ATPase 1, pseudogene
Other alias
HGNC (Hugo) AFG3L1P
LocusID (NCBI) 172
Atlas_Id 60181
Location 16q24.3  [Link to chromosome band 16q24]
Location_base_pair Starts at 90044107 and ends at 90066961 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
AFG3L1P (16q24.3) / AFG3L1P (16q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AFG3L1P   314
Cards
Entrez_Gene (NCBI)AFG3L1P  172  AFG3-like AAA ATPase 1, pseudogene
AliasesAFG3; AFG3L1
GeneCards (Weizmann)AFG3L1P
Ensembl hg19 (Hinxton)ENSG00000223959 [Gene_View]  chr16:90044107-90066961 [Contig_View]  AFG3L1P [Vega]
Ensembl hg38 (Hinxton)ENSG00000223959 [Gene_View]  chr16:90044107-90066961 [Contig_View]  AFG3L1P [Vega]
ICGC DataPortalENSG00000223959
TCGA cBioPortalAFG3L1P
AceView (NCBI)AFG3L1P
Genatlas (Paris)AFG3L1P
WikiGenes172
SOURCE (Princeton)AFG3L1P
Genetics Home Reference (NIH)AFG3L1P
Genomic and cartography
GoldenPath hg19 (UCSC)AFG3L1P  -     chr16:90044107-90066961 +  16q24.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)AFG3L1P  -     16q24.3   [Description]    (hg38-Dec_2013)
EnsemblAFG3L1P - 16q24.3 [CytoView hg19]  AFG3L1P - 16q24.3 [CytoView hg38]
Mapping of homologs : NCBIAFG3L1P [Mapview hg19]  AFG3L1P [Mapview hg38]
OMIM603020   
Gene and transcription
Genbank (Entrez)AF329691 AF329692 AF329693 AF329694 AJ001495
RefSeq transcript (Entrez)NM_001031805 NM_001132
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929403
Consensus coding sequences : CCDS (NCBI)AFG3L1P
Cluster EST : UnigeneHs.534773 [ NCBI ]
CGAP (NCI)Hs.534773
Alternative Splicing GalleryENSG00000223959
Gene ExpressionAFG3L1P [ NCBI-GEO ]   AFG3L1P [ EBI - ARRAY_EXPRESS ]   AFG3L1P [ SEEK ]   AFG3L1P [ MEM ]
Gene Expression Viewer (FireBrowse)AFG3L1P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)172
GTEX Portal (Tissue expression)AFG3L1P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AFG3L1P
DMDM Disease mutations172
Blocks (Seattle)AFG3L1P
Human Protein AtlasENSG00000223959
HPRD04315
IPIIPI01017936   
Protein Interaction databases
FunCoupENSG00000223959
BioGRIDAFG3L1P
STRING (EMBL)AFG3L1P
ZODIACAFG3L1P
Ontologies - Pathways
Huge Navigator AFG3L1P [HugePedia]
snp3D : Map Gene to Disease172
BioCentury BCIQAFG3L1P
ClinGenAFG3L1P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD172
Chemical/Pharm GKB GenePA24611
Clinical trialAFG3L1P
Miscellaneous
canSAR (ICR)AFG3L1P (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAFG3L1P
EVEXAFG3L1P
GoPubMedAFG3L1P
iHOPAFG3L1P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:53:51 CET 2017

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