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AGAP12P (ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene)

Identity

Alias (NCBI)CTGLF12P
PTPN20CP
HGNC (Hugo) AGAP12P
HGNC Alias symbbA164N7.2
HGNC Previous nameCTGLF12P
HGNC Previous namecentaurin, gamma-like family, member 12 pseudogene
LocusID (NCBI) 414224
Atlas_Id 77807
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 48010134 and ends at 48031640 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)AGAP12P   23661
Cards
Entrez_Gene (NCBI)AGAP12P    ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene
AliasesCTGLF12P; PTPN20CP
GeneCards (Weizmann)AGAP12P
Ensembl hg19 (Hinxton)ENSG00000265018 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265018 [Gene_View]  ENSG00000265018 [Sequence]  chr10:48010134-48031640 [Contig_View]  AGAP12P [Vega]
ICGC DataPortalENSG00000265018
TCGA cBioPortalAGAP12P
AceView (NCBI)AGAP12P
Genatlas (Paris)AGAP12P
SOURCE (Princeton)AGAP12P
Genetics Home Reference (NIH)AGAP12P
Genomic and cartography
GoldenPath hg38 (UCSC)AGAP12P  -     chr10:48010134-48031640 -  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AGAP12P  -     10q11.22   [Description]    (hg19-Feb_2009)
GoldenPathAGAP12P - 10q11.22 [CytoView hg19]  AGAP12P - 10q11.22 [CytoView hg38]
ImmunoBaseENSG00000265018
genome Data Viewer NCBIAGAP12P [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC127745 MH721908
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AGAP12P
Alternative Splicing GalleryENSG00000265018
Gene ExpressionAGAP12P [ NCBI-GEO ]   AGAP12P [ EBI - ARRAY_EXPRESS ]   AGAP12P [ SEEK ]   AGAP12P [ MEM ]
Gene Expression Viewer (FireBrowse)AGAP12P [ Firebrowse - Broad ]
GenevisibleExpression of AGAP12P in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)414224
GTEX Portal (Tissue expression)AGAP12P
Human Protein AtlasENSG00000265018-AGAP12P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AGAP12P
Blocks (Seattle)AGAP12P
Human Protein Atlas [tissue]ENSG00000265018-AGAP12P [tissue]
Protein Interaction databases
BioGRIDAGAP12P
STRING (EMBL)AGAP12P
ZODIACAGAP12P
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAGAP12P
EVEXAGAP12P
GoPubMedAGAP12P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 16:45:20 CET 2020

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