Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

AGBL4-IT1 (AGBL4 intronic transcript 1)

Identity

Alias_namesAGBL4 intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) AGBL4-IT1
LocusID (NCBI) 100874313
Atlas_Id 60195
Location 1p33  [Link to chromosome band 1p33]
Location_base_pair Starts at 49374201 and ends at 49472085 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AGBL4-IT1   41482
Cards
Entrez_Gene (NCBI)AGBL4-IT1  100874313  AGBL4 intronic transcript 1
Aliases
GeneCards (Weizmann)AGBL4-IT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:49374201-49472085 [Contig_View]  AGBL4-IT1 [Vega]
TCGA cBioPortalAGBL4-IT1
AceView (NCBI)AGBL4-IT1
Genatlas (Paris)AGBL4-IT1
WikiGenes100874313
SOURCE (Princeton)AGBL4-IT1
Genetics Home Reference (NIH)AGBL4-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)AGBL4-IT1  -     chr1:49374201-49472085 -  1p33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AGBL4-IT1  -     1p33   [Description]    (hg19-Feb_2009)
EnsemblAGBL4-IT1 - 1p33 [CytoView hg19]  AGBL4-IT1 - 1p33 [CytoView hg38]
Mapping of homologs : NCBIAGBL4-IT1 [Mapview hg19]  AGBL4-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW071649
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AGBL4-IT1
Cluster EST : UnigeneHs.551277 [ NCBI ]
CGAP (NCI)Hs.551277
Gene ExpressionAGBL4-IT1 [ NCBI-GEO ]   AGBL4-IT1 [ EBI - ARRAY_EXPRESS ]   AGBL4-IT1 [ SEEK ]   AGBL4-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)AGBL4-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874313
GTEX Portal (Tissue expression)AGBL4-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AGBL4-IT1
DMDM Disease mutations100874313
Blocks (Seattle)AGBL4-IT1
Protein Interaction databases
BioGRIDAGBL4-IT1
STRING (EMBL)AGBL4-IT1
ZODIACAGBL4-IT1
Ontologies - Pathways
Huge Navigator AGBL4-IT1 [HugePedia]
snp3D : Map Gene to Disease100874313
BioCentury BCIQAGBL4-IT1
ClinGenAGBL4-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874313
Clinical trialAGBL4-IT1
Miscellaneous
canSAR (ICR)AGBL4-IT1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineAGBL4-IT1
EVEXAGBL4-IT1
GoPubMedAGBL4-IT1
iHOPAGBL4-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:01:03 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.