Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

AHSG (alpha 2-HS glycoprotein)

Identity

Alias_symbol (synonym)FETUA
A2HS
HSGA
Other aliasAHS
HGNC (Hugo) AHSG
LocusID (NCBI) 197
Atlas_Id 50849
Location 3q27.3  [Link to chromosome band 3q27]
Location_base_pair Starts at 186613061 and ends at 186621318 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AHSG (3q27.3) / ALB (4q13.3)AHSG (3q27.3) / CD74 (5q32)CNOT2 (12q15) / AHSG (3q27.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AHSG   349
Cards
Entrez_Gene (NCBI)AHSG  197  alpha 2-HS glycoprotein
AliasesA2HS; AHS; FETUA; HSGA
GeneCards (Weizmann)AHSG
Ensembl hg19 (Hinxton)ENSG00000145192 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000145192 [Gene_View]  chr3:186613061-186621318 [Contig_View]  AHSG [Vega]
ICGC DataPortalENSG00000145192
TCGA cBioPortalAHSG
AceView (NCBI)AHSG
Genatlas (Paris)AHSG
WikiGenes197
SOURCE (Princeton)AHSG
Genetics Home Reference (NIH)AHSG
Genomic and cartography
GoldenPath hg38 (UCSC)AHSG  -     chr3:186613061-186621318 +  3q27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AHSG  -     3q27.3   [Description]    (hg19-Feb_2009)
EnsemblAHSG - 3q27.3 [CytoView hg19]  AHSG - 3q27.3 [CytoView hg38]
Mapping of homologs : NCBIAHSG [Mapview hg19]  AHSG [Mapview hg38]
OMIM138680   
Gene and transcription
Genbank (Entrez)AK292751 AK298447 AK303754 AK312969 BC048198
RefSeq transcript (Entrez)NM_001622
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AHSG
Cluster EST : UnigeneHs.324746 [ NCBI ]
CGAP (NCI)Hs.324746
Alternative Splicing GalleryENSG00000145192
Gene ExpressionAHSG [ NCBI-GEO ]   AHSG [ EBI - ARRAY_EXPRESS ]   AHSG [ SEEK ]   AHSG [ MEM ]
Gene Expression Viewer (FireBrowse)AHSG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)197
GTEX Portal (Tissue expression)AHSG
Human Protein AtlasENSG00000145192-AHSG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP02765   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP02765  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP02765
Splice isoforms : SwissVarP02765
PhosPhoSitePlusP02765
Domaine pattern : Prosite (Expaxy)CYSTATIN_FETUIN_A (PS51529)    FETUIN_1 (PS01254)    FETUIN_2 (PS01255)   
Domains : Interpro (EBI)Cystatin_dom    Cystatin_Fetuin_A    Prot_inh_fetuin_CS   
Domain families : Pfam (Sanger)Cystatin (PF00031)   
Domain families : Pfam (NCBI)pfam00031   
Domain families : Smart (EMBL)CY (SM00043)  
Conserved Domain (NCBI)AHSG
DMDM Disease mutations197
Blocks (Seattle)AHSG
SuperfamilyP02765
Human Protein Atlas [tissue]ENSG00000145192-AHSG [tissue]
Peptide AtlasP02765
HPRD00727
IPIIPI00953689   IPI00022431   
Protein Interaction databases
DIP (DOE-UCLA)P02765
IntAct (EBI)P02765
FunCoupENSG00000145192
BioGRIDAHSG
STRING (EMBL)AHSG
ZODIACAHSG
Ontologies - Pathways
QuickGOP02765
Ontology : AmiGOskeletal system development  ossification  platelet degranulation  endopeptidase inhibitor activity  cysteine-type endopeptidase inhibitor activity  extracellular region  extracellular region  extracellular space  extracellular space  Golgi apparatus  pinocytosis  acute-phase response  negative regulation of endopeptidase activity  kinase inhibitor activity  regulation of bone mineralization  negative regulation of bone mineralization  extracellular matrix  platelet alpha granule lumen  secretory granule lumen  negative regulation of phosphorylation  neutrophil degranulation  negative regulation of insulin receptor signaling pathway  regulation of inflammatory response  positive regulation of phagocytosis  extracellular exosome  negative regulation of biomineral tissue development  blood microparticle  
Ontology : EGO-EBIskeletal system development  ossification  platelet degranulation  endopeptidase inhibitor activity  cysteine-type endopeptidase inhibitor activity  extracellular region  extracellular region  extracellular space  extracellular space  Golgi apparatus  pinocytosis  acute-phase response  negative regulation of endopeptidase activity  kinase inhibitor activity  regulation of bone mineralization  negative regulation of bone mineralization  extracellular matrix  platelet alpha granule lumen  secretory granule lumen  negative regulation of phosphorylation  neutrophil degranulation  negative regulation of insulin receptor signaling pathway  regulation of inflammatory response  positive regulation of phagocytosis  extracellular exosome  negative regulation of biomineral tissue development  blood microparticle  
NDEx NetworkAHSG
Atlas of Cancer Signalling NetworkAHSG
Wikipedia pathwaysAHSG
Orthology - Evolution
OrthoDB197
GeneTree (enSembl)ENSG00000145192
Phylogenetic Trees/Animal Genes : TreeFamAHSG
HOVERGENP02765
HOGENOMP02765
Homologs : HomoloGeneAHSG
Homology/Alignments : Family Browser (UCSC)AHSG
Gene fusions - Rearrangements
Fusion: Tumor Portal AHSG
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAHSG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AHSG
dbVarAHSG
ClinVarAHSG
1000_GenomesAHSG 
Exome Variant ServerAHSG
ExAC (Exome Aggregation Consortium)ENSG00000145192
GNOMAD BrowserENSG00000145192
Genetic variants : HAPMAP197
Genomic Variants (DGV)AHSG [DGVbeta]
DECIPHERAHSG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAHSG 
Mutations
ICGC Data PortalAHSG 
TCGA Data PortalAHSG 
Broad Tumor PortalAHSG
OASIS PortalAHSG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAHSG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAHSG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AHSG
DgiDB (Drug Gene Interaction Database)AHSG
DoCM (Curated mutations)AHSG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AHSG (select a term)
intoGenAHSG
Cancer3DAHSG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM138680   
Orphanet
MedgenAHSG
Genetic Testing Registry AHSG
NextProtP02765 [Medical]
TSGene197
GENETestsAHSG
Target ValidationAHSG
Huge Navigator AHSG [HugePedia]
snp3D : Map Gene to Disease197
BioCentury BCIQAHSG
ClinGenAHSG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD197
Chemical/Pharm GKB GenePA24642
Clinical trialAHSG
Miscellaneous
canSAR (ICR)AHSG (select the gene name)
Probes
Litterature
PubMed253 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAHSG
EVEXAHSG
GoPubMedAHSG
iHOPAHSG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:39:45 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.