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AIDA (axin interactor, dorsalization associated)

Identity

Alias_namesC1orf80
chromosome 1 open reading frame 80
Alias_symbol (synonym)FLJ12806
Other alias
HGNC (Hugo) AIDA
LocusID (NCBI) 64853
Atlas_Id 60216
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 222668013 and ends at 222712522 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AIDA   25761
Cards
Entrez_Gene (NCBI)AIDA  64853  axin interactor, dorsalization associated
AliasesC1orf80
GeneCards (Weizmann)AIDA
Ensembl hg19 (Hinxton)ENSG00000186063 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186063 [Gene_View]  chr1:222668013-222712522 [Contig_View]  AIDA [Vega]
ICGC DataPortalENSG00000186063
TCGA cBioPortalAIDA
AceView (NCBI)AIDA
Genatlas (Paris)AIDA
WikiGenes64853
SOURCE (Princeton)AIDA
Genetics Home Reference (NIH)AIDA
Genomic and cartography
GoldenPath hg38 (UCSC)AIDA  -     chr1:222668013-222712522 -  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AIDA  -     1q41   [Description]    (hg19-Feb_2009)
EnsemblAIDA - 1q41 [CytoView hg19]  AIDA - 1q41 [CytoView hg38]
Mapping of homologs : NCBIAIDA [Mapview hg19]  AIDA [Mapview hg38]
OMIM612375   
Gene and transcription
Genbank (Entrez)AF131838 AK022868 AK289865 AK301870 AL833718
RefSeq transcript (Entrez)NM_022831
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AIDA
Cluster EST : UnigeneHs.534965 [ NCBI ]
CGAP (NCI)Hs.534965
Alternative Splicing GalleryENSG00000186063
Gene ExpressionAIDA [ NCBI-GEO ]   AIDA [ EBI - ARRAY_EXPRESS ]   AIDA [ SEEK ]   AIDA [ MEM ]
Gene Expression Viewer (FireBrowse)AIDA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64853
GTEX Portal (Tissue expression)AIDA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96BJ3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96BJ3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96BJ3
Splice isoforms : SwissVarQ96BJ3
PhosPhoSitePlusQ96BJ3
Domains : Interpro (EBI)Aida_C    AIDA_N   
Domain families : Pfam (Sanger)Aida_C2 (PF14186)    Aida_N (PF08910)   
Domain families : Pfam (NCBI)pfam14186    pfam08910   
Conserved Domain (NCBI)AIDA
DMDM Disease mutations64853
Blocks (Seattle)AIDA
SuperfamilyQ96BJ3
Human Protein AtlasENSG00000186063
Peptide AtlasQ96BJ3
HPRD07798
IPIIPI00303602   IPI00480020   IPI00867514   
Protein Interaction databases
DIP (DOE-UCLA)Q96BJ3
IntAct (EBI)Q96BJ3
FunCoupENSG00000186063
BioGRIDAIDA
STRING (EMBL)AIDA
ZODIACAIDA
Ontologies - Pathways
QuickGOQ96BJ3
Ontology : AmiGOprotein binding  cellular_component  cytoplasm  dorsal/ventral pattern formation  membrane  protein domain specific binding  phosphatidylinositol binding  regulation of protein homodimerization activity  negative regulation of JUN kinase activity  negative regulation of JNK cascade  determination of ventral identity  
Ontology : EGO-EBIprotein binding  cellular_component  cytoplasm  dorsal/ventral pattern formation  membrane  protein domain specific binding  phosphatidylinositol binding  regulation of protein homodimerization activity  negative regulation of JUN kinase activity  negative regulation of JNK cascade  determination of ventral identity  
NDEx NetworkAIDA
Atlas of Cancer Signalling NetworkAIDA
Wikipedia pathwaysAIDA
Orthology - Evolution
OrthoDB64853
GeneTree (enSembl)ENSG00000186063
Phylogenetic Trees/Animal Genes : TreeFamAIDA
HOVERGENQ96BJ3
HOGENOMQ96BJ3
Homologs : HomoloGeneAIDA
Homology/Alignments : Family Browser (UCSC)AIDA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAIDA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AIDA
dbVarAIDA
ClinVarAIDA
1000_GenomesAIDA 
Exome Variant ServerAIDA
ExAC (Exome Aggregation Consortium)AIDA (select the gene name)
Genetic variants : HAPMAP64853
Genomic Variants (DGV)AIDA [DGVbeta]
DECIPHERAIDA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAIDA 
Mutations
ICGC Data PortalAIDA 
TCGA Data PortalAIDA 
Broad Tumor PortalAIDA
OASIS PortalAIDA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAIDA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAIDA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AIDA
DgiDB (Drug Gene Interaction Database)AIDA
DoCM (Curated mutations)AIDA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AIDA (select a term)
intoGenAIDA
Cancer3DAIDA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612375   
Orphanet
MedgenAIDA
Genetic Testing Registry AIDA
NextProtQ96BJ3 [Medical]
TSGene64853
GENETestsAIDA
Target ValidationAIDA
Huge Navigator AIDA [HugePedia]
snp3D : Map Gene to Disease64853
BioCentury BCIQAIDA
ClinGenAIDA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64853
Chemical/Pharm GKB GenePA162376104
Clinical trialAIDA
Miscellaneous
canSAR (ICR)AIDA (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAIDA
EVEXAIDA
GoPubMedAIDA
iHOPAIDA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:37:47 CEST 2017

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