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AJM1 (apical junction component 1 homolog)

Identity

Alias (NCBI)C9orf172
ajm-1
HGNC (Hugo) AJM1
LocusID (NCBI) 389813
Atlas_Id 80548
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 136842506 and ends at 136847345 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)AJM1   37284
Cards
Entrez_Gene (NCBI)AJM1  389813  apical junction component 1 homolog
AliasesC9orf172; ajm-1
GeneCards (Weizmann)AJM1
Ensembl hg19 (Hinxton)ENSG00000232434 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232434 [Gene_View]  ENSG00000232434 [Sequence]  chr9:136842506-136847345 [Contig_View]  AJM1 [Vega]
ICGC DataPortalENSG00000232434
TCGA cBioPortalAJM1
AceView (NCBI)AJM1
Genatlas (Paris)AJM1
WikiGenes389813
SOURCE (Princeton)AJM1
Genetics Home Reference (NIH)AJM1
Genomic and cartography
GoldenPath hg38 (UCSC)AJM1  -     chr9:136842506-136847345 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AJM1  -     9q34.3   [Description]    (hg19-Feb_2009)
GoldenPathAJM1 - 9q34.3 [CytoView hg19]  AJM1 - 9q34.3 [CytoView hg38]
ImmunoBaseENSG00000232434
genome Data Viewer NCBIAJM1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001080482
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AJM1
Alternative Splicing GalleryENSG00000232434
Gene ExpressionAJM1 [ NCBI-GEO ]   AJM1 [ EBI - ARRAY_EXPRESS ]   AJM1 [ SEEK ]   AJM1 [ MEM ]
Gene Expression Viewer (FireBrowse)AJM1 [ Firebrowse - Broad ]
GenevisibleExpression of AJM1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)389813
GTEX Portal (Tissue expression)AJM1
Human Protein AtlasENSG00000232434-AJM1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AJM1
DMDM Disease mutations389813
Blocks (Seattle)AJM1
Human Protein Atlas [tissue]ENSG00000232434-AJM1 [tissue]
IPIIPI00847762   
Protein Interaction databases
FunCoupENSG00000232434
BioGRIDAJM1
STRING (EMBL)AJM1
ZODIACAJM1
Ontologies - Pathways
Huge Navigator AJM1 [HugePedia]
snp3D : Map Gene to Disease389813
BioCentury BCIQAJM1
ClinGenAJM1
Clinical trials, drugs, therapy
Protein Interactions : CTD389813
Pharm GKB GenePA165585544
Clinical trialAJM1
Miscellaneous
canSAR (ICR)AJM1 (select the gene name)
HarmonizomeAJM1
DataMed IndexAJM1
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAJM1
EVEXAJM1
GoPubMedAJM1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:05:21 CEST 2020

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