Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

AK6 (adenylate kinase 6)

Identity

Alias_symbol (synonym)CINAP
Other aliasAD-004
CGI-137
CIP
hCINAP
HGNC (Hugo) AK6
LocusID (NCBI) 102157402
Atlas_Id 60220
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 69351726 and ends at 69370013 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AK6   49151
Cards
Entrez_Gene (NCBI)AK6  102157402  adenylate kinase 6
AliasesAD-004; CGI-137; CINAP; CIP; 
hCINAP
GeneCards (Weizmann)AK6
Ensembl hg19 (Hinxton)ENSG00000085231 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000085231 [Gene_View]  chr5:69351726-69370013 [Contig_View]  AK6 [Vega]
ICGC DataPortalENSG00000085231
TCGA cBioPortalAK6
AceView (NCBI)AK6
Genatlas (Paris)AK6
WikiGenes102157402
SOURCE (Princeton)AK6
Genetics Home Reference (NIH)AK6
Genomic and cartography
GoldenPath hg38 (UCSC)AK6  -     chr5:69351726-69370013 -  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AK6  -     5q13.2   [Description]    (hg19-Feb_2009)
EnsemblAK6 - 5q13.2 [CytoView hg19]  AK6 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBIAK6 [Mapview hg19]  AK6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF110777 AF151895 AJ878880 AJ878881 BC007349
RefSeq transcript (Entrez)NM_001015891 NM_016283
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AK6
Cluster EST : UnigeneHs.653163 [ NCBI ]
CGAP (NCI)Hs.653163
Alternative Splicing GalleryENSG00000085231
Gene ExpressionAK6 [ NCBI-GEO ]   AK6 [ EBI - ARRAY_EXPRESS ]   AK6 [ SEEK ]   AK6 [ MEM ]
Gene Expression Viewer (FireBrowse)AK6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102157402
GTEX Portal (Tissue expression)AK6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y3D8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y3D8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y3D8
Splice isoforms : SwissVarQ9Y3D8
PhosPhoSitePlusQ9Y3D8
Domains : Interpro (EBI)Adenyl_kinase_AK6    P-loop_NTPase   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AK6
DMDM Disease mutations102157402
Blocks (Seattle)AK6
PDB (SRS)1RKB    3IIJ    3IIK    3IIL    3IIM    5JZV   
PDB (PDBSum)1RKB    3IIJ    3IIK    3IIL    3IIM    5JZV   
PDB (IMB)1RKB    3IIJ    3IIK    3IIL    3IIM    5JZV   
PDB (RSDB)1RKB    3IIJ    3IIK    3IIL    3IIM    5JZV   
Structural Biology KnowledgeBase1RKB    3IIJ    3IIK    3IIL    3IIM    5JZV   
SCOP (Structural Classification of Proteins)1RKB    3IIJ    3IIK    3IIL    3IIM    5JZV   
CATH (Classification of proteins structures)1RKB    3IIJ    3IIK    3IIL    3IIM    5JZV   
SuperfamilyQ9Y3D8
Human Protein AtlasENSG00000085231
Peptide AtlasQ9Y3D8
Protein Interaction databases
DIP (DOE-UCLA)Q9Y3D8
IntAct (EBI)Q9Y3D8
FunCoupENSG00000085231
BioGRIDAK6
STRING (EMBL)AK6
ZODIACAK6
Ontologies - Pathways
QuickGOQ9Y3D8
Ontology : AmiGOadenylate kinase activity  protein binding  ATP binding  nucleoplasm  nucleoplasm  nucleolus  cytoplasm  cytosol  Cajal body  nucleobase-containing small molecule interconversion  membrane  nucleotide phosphorylation  nucleoside monophosphate phosphorylation  nucleoside phosphate kinase activity  
Ontology : EGO-EBIadenylate kinase activity  protein binding  ATP binding  nucleoplasm  nucleoplasm  nucleolus  cytoplasm  cytosol  Cajal body  nucleobase-containing small molecule interconversion  membrane  nucleotide phosphorylation  nucleoside monophosphate phosphorylation  nucleoside phosphate kinase activity  
NDEx NetworkAK6
Atlas of Cancer Signalling NetworkAK6
Wikipedia pathwaysAK6
Orthology - Evolution
OrthoDB102157402
GeneTree (enSembl)ENSG00000085231
Phylogenetic Trees/Animal Genes : TreeFamAK6
HOVERGENQ9Y3D8
HOGENOMQ9Y3D8
Homologs : HomoloGeneAK6
Homology/Alignments : Family Browser (UCSC)AK6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAK6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AK6
dbVarAK6
ClinVarAK6
1000_GenomesAK6 
Exome Variant ServerAK6
ExAC (Exome Aggregation Consortium)AK6 (select the gene name)
Genetic variants : HAPMAP102157402
Genomic Variants (DGV)AK6 [DGVbeta]
DECIPHERAK6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAK6 
Mutations
ICGC Data PortalAK6 
TCGA Data PortalAK6 
Broad Tumor PortalAK6
OASIS PortalAK6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDAK6
BioMutasearch AK6
DgiDB (Drug Gene Interaction Database)AK6
DoCM (Curated mutations)AK6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AK6 (select a term)
intoGenAK6
Cancer3DAK6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenAK6
Genetic Testing Registry AK6
NextProtQ9Y3D8 [Medical]
TSGene102157402
GENETestsAK6
Target ValidationAK6
Huge Navigator AK6 [HugePedia]
snp3D : Map Gene to Disease102157402
BioCentury BCIQAK6
ClinGenAK6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102157402
Chemical/Pharm GKB GenePA166123663
Clinical trialAK6
Miscellaneous
canSAR (ICR)AK6 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAK6
EVEXAK6
GoPubMedAK6
iHOPAK6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:37:47 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.