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AKAP11 (A-kinase anchoring protein 11)

Identity

Alias_namesA kinase (PRKA) anchor protein 11
Alias_symbol (synonym)KIAA0629
AKAP220
PRKA11
FLJ11304
DKFZp781I12161
PPP1R44
Other aliasAKAP-11
HGNC (Hugo) AKAP11
LocusID (NCBI) 11215
Atlas_Id 60223
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 42272153 and ends at 42323267 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
AKAP11 (13q14.11) / MRPS31 (13q14.11)CTNNB1 (3p22.1) / AKAP11 (13q14.11)PER3 (1p36.23) / AKAP11 (13q14.11)
RNF219 (13q31.1) / AKAP11 (13q14.11)TMEM147 (19q13.12) / AKAP11 (13q14.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)AKAP11   369
Cards
Entrez_Gene (NCBI)AKAP11  11215  A-kinase anchoring protein 11
AliasesAKAP-11; AKAP220; PPP1R44; PRKA11
GeneCards (Weizmann)AKAP11
Ensembl hg19 (Hinxton)ENSG00000023516 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000023516 [Gene_View]  chr13:42272153-42323267 [Contig_View]  AKAP11 [Vega]
ICGC DataPortalENSG00000023516
TCGA cBioPortalAKAP11
AceView (NCBI)AKAP11
Genatlas (Paris)AKAP11
WikiGenes11215
SOURCE (Princeton)AKAP11
Genetics Home Reference (NIH)AKAP11
Genomic and cartography
GoldenPath hg38 (UCSC)AKAP11  -     chr13:42272153-42323267 +  13q14.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AKAP11  -     13q14.11   [Description]    (hg19-Feb_2009)
EnsemblAKAP11 - 13q14.11 [CytoView hg19]  AKAP11 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBIAKAP11 [Mapview hg19]  AKAP11 [Mapview hg38]
OMIM604696   
Gene and transcription
Genbank (Entrez)AB014529 AF176555 AK002166 AK074384 BC156135
RefSeq transcript (Entrez)NM_016248 NM_144490
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AKAP11
Cluster EST : UnigeneHs.105105 [ NCBI ]
CGAP (NCI)Hs.105105
Alternative Splicing GalleryENSG00000023516
Gene ExpressionAKAP11 [ NCBI-GEO ]   AKAP11 [ EBI - ARRAY_EXPRESS ]   AKAP11 [ SEEK ]   AKAP11 [ MEM ]
Gene Expression Viewer (FireBrowse)AKAP11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11215
GTEX Portal (Tissue expression)AKAP11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UKA4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UKA4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UKA4
Splice isoforms : SwissVarQ9UKA4
PhosPhoSitePlusQ9UKA4
Domains : Interpro (EBI)SPHK1-interactor_AKAP_110   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)AKAP11
DMDM Disease mutations11215
Blocks (Seattle)AKAP11
SuperfamilyQ9UKA4
Human Protein AtlasENSG00000023516
Peptide AtlasQ9UKA4
HPRD05261
IPIIPI00007411   
Protein Interaction databases
DIP (DOE-UCLA)Q9UKA4
IntAct (EBI)Q9UKA4
FunCoupENSG00000023516
BioGRIDAKAP11
STRING (EMBL)AKAP11
ZODIACAKAP11
Ontologies - Pathways
QuickGOQ9UKA4
Ontology : AmiGOnucleolus  peroxisome  microtubule organizing center  cytosol  plasma membrane  protein phosphatase 1 binding  regulation of protein kinase A signaling  intracellular signal transduction  protein kinase A binding  
Ontology : EGO-EBInucleolus  peroxisome  microtubule organizing center  cytosol  plasma membrane  protein phosphatase 1 binding  regulation of protein kinase A signaling  intracellular signal transduction  protein kinase A binding  
NDEx NetworkAKAP11
Atlas of Cancer Signalling NetworkAKAP11
Wikipedia pathwaysAKAP11
Orthology - Evolution
OrthoDB11215
GeneTree (enSembl)ENSG00000023516
Phylogenetic Trees/Animal Genes : TreeFamAKAP11
HOVERGENQ9UKA4
HOGENOMQ9UKA4
Homologs : HomoloGeneAKAP11
Homology/Alignments : Family Browser (UCSC)AKAP11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAKAP11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AKAP11
dbVarAKAP11
ClinVarAKAP11
1000_GenomesAKAP11 
Exome Variant ServerAKAP11
ExAC (Exome Aggregation Consortium)AKAP11 (select the gene name)
Genetic variants : HAPMAP11215
Genomic Variants (DGV)AKAP11 [DGVbeta]
DECIPHERAKAP11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAKAP11 
Mutations
ICGC Data PortalAKAP11 
TCGA Data PortalAKAP11 
Broad Tumor PortalAKAP11
OASIS PortalAKAP11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAKAP11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAKAP11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AKAP11
DgiDB (Drug Gene Interaction Database)AKAP11
DoCM (Curated mutations)AKAP11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AKAP11 (select a term)
intoGenAKAP11
Cancer3DAKAP11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604696   
Orphanet
MedgenAKAP11
Genetic Testing Registry AKAP11
NextProtQ9UKA4 [Medical]
TSGene11215
GENETestsAKAP11
Target ValidationAKAP11
Huge Navigator AKAP11 [HugePedia]
snp3D : Map Gene to Disease11215
BioCentury BCIQAKAP11
ClinGenAKAP11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11215
Chemical/Pharm GKB GenePA24663
Clinical trialAKAP11
Miscellaneous
canSAR (ICR)AKAP11 (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAKAP11
EVEXAKAP11
GoPubMedAKAP11
iHOPAKAP11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:01:06 CEST 2017

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