Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

AKTIP (AKT interacting protein)

Identity

Alias_namesFTS
fused toes (mouse) homolog
fused toes homolog (mouse)
Alias_symbol (synonym)FLJ13258
Other aliasFT1
HGNC (Hugo) AKTIP
LocusID (NCBI) 64400
Atlas_Id 52260
Location 16q12.2  [Link to chromosome band 16q12]
Location_base_pair Starts at 53491040 and ends at 53503304 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)AKTIP   16710
Cards
Entrez_Gene (NCBI)AKTIP  64400  AKT interacting protein
AliasesFT1; FTS
GeneCards (Weizmann)AKTIP
Ensembl hg19 (Hinxton)ENSG00000166971 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166971 [Gene_View]  chr16:53491040-53503304 [Contig_View]  AKTIP [Vega]
ICGC DataPortalENSG00000166971
TCGA cBioPortalAKTIP
AceView (NCBI)AKTIP
Genatlas (Paris)AKTIP
WikiGenes64400
SOURCE (Princeton)AKTIP
Genetics Home Reference (NIH)AKTIP
Genomic and cartography
GoldenPath hg38 (UCSC)AKTIP  -     chr16:53491040-53503304 -  16q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)AKTIP  -     16q12.2   [Description]    (hg19-Feb_2009)
EnsemblAKTIP - 16q12.2 [CytoView hg19]  AKTIP - 16q12.2 [CytoView hg38]
Mapping of homologs : NCBIAKTIP [Mapview hg19]  AKTIP [Mapview hg38]
OMIM608483   
Gene and transcription
Genbank (Entrez)AK023320 AK098222 AK222743 AK303503 AL133106
RefSeq transcript (Entrez)NM_001012398 NM_001308325 NM_022476
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)AKTIP
Cluster EST : UnigeneHs.380897 [ NCBI ]
CGAP (NCI)Hs.380897
Alternative Splicing GalleryENSG00000166971
Gene ExpressionAKTIP [ NCBI-GEO ]   AKTIP [ EBI - ARRAY_EXPRESS ]   AKTIP [ SEEK ]   AKTIP [ MEM ]
Gene Expression Viewer (FireBrowse)AKTIP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64400
GTEX Portal (Tissue expression)AKTIP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8T0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8T0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8T0
Splice isoforms : SwissVarQ9H8T0
PhosPhoSitePlusQ9H8T0
Domaine pattern : Prosite (Expaxy)UBIQUITIN_CONJUGAT_2 (PS50127)   
Domains : Interpro (EBI)UBQ-conjugat_E2    UBQ-conjugating_enzyme/RWD   
Domain families : Pfam (Sanger)UQ_con (PF00179)   
Domain families : Pfam (NCBI)pfam00179   
Conserved Domain (NCBI)AKTIP
DMDM Disease mutations64400
Blocks (Seattle)AKTIP
SuperfamilyQ9H8T0
Human Protein AtlasENSG00000166971
Peptide AtlasQ9H8T0
HPRD07467
IPIIPI00008304   IPI00936141   IPI00910981   
Protein Interaction databases
DIP (DOE-UCLA)Q9H8T0
IntAct (EBI)Q9H8T0
FunCoupENSG00000166971
BioGRIDAKTIP
STRING (EMBL)AKTIP
ZODIACAKTIP
Ontologies - Pathways
QuickGOQ9H8T0
Ontology : AmiGOpositive regulation of protein phosphorylation  protein binding  cytosol  plasma membrane  apoptotic process  endosome organization  lysosome organization  endosome to lysosome transport  protein transport  protein ubiquitination  ubiquitin-like protein transferase activity  HOPS complex  ubiquitin protein ligase binding  positive regulation of protein binding  early endosome to late endosome transport  ubiquitin protein ligase activity  FHF complex  
Ontology : EGO-EBIpositive regulation of protein phosphorylation  protein binding  cytosol  plasma membrane  apoptotic process  endosome organization  lysosome organization  endosome to lysosome transport  protein transport  protein ubiquitination  ubiquitin-like protein transferase activity  HOPS complex  ubiquitin protein ligase binding  positive regulation of protein binding  early endosome to late endosome transport  ubiquitin protein ligase activity  FHF complex  
NDEx NetworkAKTIP
Atlas of Cancer Signalling NetworkAKTIP
Wikipedia pathwaysAKTIP
Orthology - Evolution
OrthoDB64400
GeneTree (enSembl)ENSG00000166971
Phylogenetic Trees/Animal Genes : TreeFamAKTIP
HOVERGENQ9H8T0
HOGENOMQ9H8T0
Homologs : HomoloGeneAKTIP
Homology/Alignments : Family Browser (UCSC)AKTIP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerAKTIP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)AKTIP
dbVarAKTIP
ClinVarAKTIP
1000_GenomesAKTIP 
Exome Variant ServerAKTIP
ExAC (Exome Aggregation Consortium)AKTIP (select the gene name)
Genetic variants : HAPMAP64400
Genomic Variants (DGV)AKTIP [DGVbeta]
DECIPHERAKTIP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisAKTIP 
Mutations
ICGC Data PortalAKTIP 
TCGA Data PortalAKTIP 
Broad Tumor PortalAKTIP
OASIS PortalAKTIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICAKTIP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDAKTIP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch AKTIP
DgiDB (Drug Gene Interaction Database)AKTIP
DoCM (Curated mutations)AKTIP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)AKTIP (select a term)
intoGenAKTIP
Cancer3DAKTIP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608483   
Orphanet
MedgenAKTIP
Genetic Testing Registry AKTIP
NextProtQ9H8T0 [Medical]
TSGene64400
GENETestsAKTIP
Target ValidationAKTIP
Huge Navigator AKTIP [HugePedia]
snp3D : Map Gene to Disease64400
BioCentury BCIQAKTIP
ClinGenAKTIP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64400
Chemical/Pharm GKB GenePA162376210
Clinical trialAKTIP
Miscellaneous
canSAR (ICR)AKTIP (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineAKTIP
EVEXAKTIP
GoPubMedAKTIP
iHOPAKTIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:23:22 CEST 2017
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.