Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ALDH18A1 (aldehyde dehydrogenase 18 family member A1)

Identity

Alias (NCBI)ADCL3
ARCL3A
GSAS
P5CS
PYCS
SPG9
SPG9A
SPG9B
HGNC (Hugo) ALDH18A1
HGNC Alias symbP5CS
HGNC Previous nameGSAS
 PYCS
HGNC Previous namepyrroline-5-carboxylate synthetase (glutamate gamma-semialdehyde synthetase)
 aldehyde dehydrogenase 18 family, member A1
LocusID (NCBI) 5832
Atlas_Id 60238
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 95605943 and ends at 95656711 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ALDH18A1 (10q24.1) / ALDH18A1 (10q24.1)ALDH18A1 (10q24.1) / CALCOCO2 (17q21.32)ALDH18A1 (10q24.1) / HGSNAT (8p11.21)
ALDH18A1 (10q24.1) / ZNF271P (18q12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ALDH18A1   9722
Cards
Entrez_Gene (NCBI)ALDH18A1    aldehyde dehydrogenase 18 family member A1
AliasesADCL3; ARCL3A; GSAS; P5CS; 
PYCS; SPG9; SPG9A; SPG9B
GeneCards (Weizmann)ALDH18A1
Ensembl hg19 (Hinxton)ENSG00000059573 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000059573 [Gene_View]  ENSG00000059573 [Sequence]  chr10:95605943-95656711 [Contig_View]  ALDH18A1 [Vega]
ICGC DataPortalENSG00000059573
TCGA cBioPortalALDH18A1
AceView (NCBI)ALDH18A1
Genatlas (Paris)ALDH18A1
SOURCE (Princeton)ALDH18A1
Genetics Home Reference (NIH)ALDH18A1
Genomic and cartography
GoldenPath hg38 (UCSC)ALDH18A1  -     chr10:95605943-95656711 -  10q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ALDH18A1  -     10q24.1   [Description]    (hg19-Feb_2009)
GoldenPathALDH18A1 - 10q24.1 [CytoView hg19]  ALDH18A1 - 10q24.1 [CytoView hg38]
ImmunoBaseENSG00000059573
Genome Data Viewer NCBIALDH18A1 [Mapview hg19]  
OMIM138250   219150   601162   616586   616603   
Gene and transcription
Genbank (Entrez)AK126355 AK225455 AK225465 AK226032 AK295487
RefSeq transcript (Entrez)NM_001017423 NM_001323412 NM_001323413 NM_001323414 NM_001323415 NM_001323416 NM_001323417 NM_001323418 NM_001323419 NM_002860
Consensus coding sequences : CCDS (NCBI)ALDH18A1
Gene ExpressionALDH18A1 [ NCBI-GEO ]   ALDH18A1 [ EBI - ARRAY_EXPRESS ]   ALDH18A1 [ SEEK ]   ALDH18A1 [ MEM ]
Gene Expression Viewer (FireBrowse)ALDH18A1 [ Firebrowse - Broad ]
GenevisibleExpression of ALDH18A1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5832
GTEX Portal (Tissue expression)ALDH18A1
Human Protein AtlasENSG00000059573-ALDH18A1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ALDH18A1
Human Protein Atlas [tissue]ENSG00000059573-ALDH18A1 [tissue]
HPRD00696
Protein Interaction databases
BioGRIDALDH18A1
STRING (EMBL)ALDH18A1
ZODIACALDH18A1
Ontologies - Pathways
Litterature
PubMed98 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXALDH18A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:41:49 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.