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ALG10 (ALG10, alpha-1,2-glucosyltransferase)

Identity

Alias_namesasparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (yeast)
asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)
Alias_symbol (synonym)FLJ14751
DIE2
ALG10A
Other aliasKCR1
HGNC (Hugo) ALG10
LocusID (NCBI) 84920
Atlas_Id 60247
Location 12p11.1  [Link to chromosome band 12p11]
Location_base_pair Starts at 34022281 and ends at 34028301 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ALG10   23162
Cards
Entrez_Gene (NCBI)ALG10  84920  ALG10, alpha-1,2-glucosyltransferase
AliasesALG10A; DIE2; KCR1
GeneCards (Weizmann)ALG10
Ensembl hg19 (Hinxton)ENSG00000139133 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000139133 [Gene_View]  chr12:34022281-34028301 [Contig_View]  ALG10 [Vega]
ICGC DataPortalENSG00000139133
TCGA cBioPortalALG10
AceView (NCBI)ALG10
Genatlas (Paris)ALG10
WikiGenes84920
SOURCE (Princeton)ALG10
Genetics Home Reference (NIH)ALG10
Genomic and cartography
GoldenPath hg38 (UCSC)ALG10  -     chr12:34022281-34028301 +  12p11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ALG10  -     12p11.1   [Description]    (hg19-Feb_2009)
EnsemblALG10 - 12p11.1 [CytoView hg19]  ALG10 - 12p11.1 [CytoView hg38]
Mapping of homologs : NCBIALG10 [Mapview hg19]  ALG10 [Mapview hg38]
OMIM603313   613688   
Gene and transcription
Genbank (Entrez)AJ312278 AK027657 AK292488 BC022336 BC033730
RefSeq transcript (Entrez)NM_032834
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ALG10
Cluster EST : UnigeneHs.102971 [ NCBI ]
CGAP (NCI)Hs.102971
Alternative Splicing GalleryENSG00000139133
Gene ExpressionALG10 [ NCBI-GEO ]   ALG10 [ EBI - ARRAY_EXPRESS ]   ALG10 [ SEEK ]   ALG10 [ MEM ]
Gene Expression Viewer (FireBrowse)ALG10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84920
GTEX Portal (Tissue expression)ALG10
Human Protein AtlasENSG00000139133-ALG10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5BKT4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5BKT4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5BKT4
Splice isoforms : SwissVarQ5BKT4
Catalytic activity : Enzyme2.4.1.256 [ Enzyme-Expasy ]   2.4.1.2562.4.1.256 [ IntEnz-EBI ]   2.4.1.256 [ BRENDA ]   2.4.1.256 [ KEGG ]   
PhosPhoSitePlusQ5BKT4
Domains : Interpro (EBI)Alg10   
Domain families : Pfam (Sanger)DIE2_ALG10 (PF04922)   
Domain families : Pfam (NCBI)pfam04922   
Conserved Domain (NCBI)ALG10
DMDM Disease mutations84920
Blocks (Seattle)ALG10
SuperfamilyQ5BKT4
Human Protein Atlas [tissue]ENSG00000139133-ALG10 [tissue]
Peptide AtlasQ5BKT4
IPIIPI00414597   IPI00797294   IPI01014140   
Protein Interaction databases
DIP (DOE-UCLA)Q5BKT4
IntAct (EBI)Q5BKT4
FunCoupENSG00000139133
BioGRIDALG10
STRING (EMBL)ALG10
ZODIACALG10
Ontologies - Pathways
QuickGOQ5BKT4
Ontology : AmiGOdolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity  endoplasmic reticulum membrane  protein glycosylation  dolichol-linked oligosaccharide biosynthetic process  integral component of membrane  
Ontology : EGO-EBIdolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity  endoplasmic reticulum membrane  protein glycosylation  dolichol-linked oligosaccharide biosynthetic process  integral component of membrane  
Pathways : KEGGN-Glycan biosynthesis   
NDEx NetworkALG10
Atlas of Cancer Signalling NetworkALG10
Wikipedia pathwaysALG10
Orthology - Evolution
OrthoDB84920
GeneTree (enSembl)ENSG00000139133
Phylogenetic Trees/Animal Genes : TreeFamALG10
HOVERGENQ5BKT4
HOGENOMQ5BKT4
Homologs : HomoloGeneALG10
Homology/Alignments : Family Browser (UCSC)ALG10
Gene fusions - Rearrangements
Tumor Fusion PortalALG10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerALG10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ALG10
dbVarALG10
ClinVarALG10
1000_GenomesALG10 
Exome Variant ServerALG10
ExAC (Exome Aggregation Consortium)ENSG00000139133
GNOMAD BrowserENSG00000139133
Genetic variants : HAPMAP84920
Genomic Variants (DGV)ALG10 [DGVbeta]
DECIPHERALG10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisALG10 
Mutations
ICGC Data PortalALG10 
TCGA Data PortalALG10 
Broad Tumor PortalALG10
OASIS PortalALG10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICALG10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDALG10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ALG10
DgiDB (Drug Gene Interaction Database)ALG10
DoCM (Curated mutations)ALG10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ALG10 (select a term)
intoGenALG10
Cancer3DALG10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603313    613688   
Orphanet
DisGeNETALG10
MedgenALG10
Genetic Testing Registry ALG10
NextProtQ5BKT4 [Medical]
TSGene84920
GENETestsALG10
Target ValidationALG10
Huge Navigator ALG10 [HugePedia]
snp3D : Map Gene to Disease84920
BioCentury BCIQALG10
ClinGenALG10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84920
Chemical/Pharm GKB GenePA134732019
Clinical trialALG10
Miscellaneous
canSAR (ICR)ALG10 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineALG10
EVEXALG10
GoPubMedALG10
iHOPALG10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:25:44 CET 2017

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