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ALG14 (ALG14, UDP-N-acetylglucosaminyltransferase subunit)

Identity

Alias_namesasparagine-linked glycosylation 14 homolog (yeast)
asparagine-linked glycosylation 14 homolog (S. cerevisiae)
Alias_symbol (synonym)MGC19780
Other aliasCMS15
HGNC (Hugo) ALG14
LocusID (NCBI) 199857
Atlas_Id 54116
Location 1p21.3  [Link to chromosome band 1p21]
Location_base_pair Starts at 95448279 and ends at 95538507 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ALG14 (1p21.3) / C1orf194 (1p13.3)ALG14 (1p21.3) / LOC158435 (9q22.32)ALG14 (1p21.3) / NRDC (1p32.3)
CNN3 (1p21.3) / ALG14 (1p21.3)MYSM1 (1p32.1) / ALG14 (1p21.3)RABEP1 (17p13.2) / ALG14 (1p21.3)
SGPP2 (2q36.1) / ALG14 (1p21.3)ALG14 1p21.3 / C1orf194 1p13.3ALG14 1p21.3 / NRD1 1p32.3
CNN3 1p21.3 / ALG14 1p21.3MYSM1 1p32.1 / ALG14 1p21.3SGPP2 2q36.1 / ALG14 1p21.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ALG14   28287
Cards
Entrez_Gene (NCBI)ALG14  199857  ALG14, UDP-N-acetylglucosaminyltransferase subunit
AliasesCMS15
GeneCards (Weizmann)ALG14
Ensembl hg19 (Hinxton)ENSG00000172339 [Gene_View]  chr1:95448279-95538507 [Contig_View]  ALG14 [Vega]
Ensembl hg38 (Hinxton)ENSG00000172339 [Gene_View]  chr1:95448279-95538507 [Contig_View]  ALG14 [Vega]
ICGC DataPortalENSG00000172339
TCGA cBioPortalALG14
AceView (NCBI)ALG14
Genatlas (Paris)ALG14
WikiGenes199857
SOURCE (Princeton)ALG14
Genetics Home Reference (NIH)ALG14
Genomic and cartography
GoldenPath hg19 (UCSC)ALG14  -     chr1:95448279-95538507 -  1p21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ALG14  -     1p21.3   [Description]    (hg38-Dec_2013)
EnsemblALG14 - 1p21.3 [CytoView hg19]  ALG14 - 1p21.3 [CytoView hg38]
Mapping of homologs : NCBIALG14 [Mapview hg19]  ALG14 [Mapview hg38]
OMIM612866   616227   
Gene and transcription
Genbank (Entrez)AK289395 AW242346 BC011706 HY073066
RefSeq transcript (Entrez)NM_001305242 NM_144988
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_042044 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)ALG14
Cluster EST : UnigeneHs.408927 [ NCBI ]
CGAP (NCI)Hs.408927
Alternative Splicing GalleryENSG00000172339
Gene ExpressionALG14 [ NCBI-GEO ]   ALG14 [ EBI - ARRAY_EXPRESS ]   ALG14 [ SEEK ]   ALG14 [ MEM ]
Gene Expression Viewer (FireBrowse)ALG14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)199857
GTEX Portal (Tissue expression)ALG14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96F25   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96F25  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96F25
Splice isoforms : SwissVarQ96F25
PhosPhoSitePlusQ96F25
Domains : Interpro (EBI)Oligosacch_biosynth_Alg14   
Domain families : Pfam (Sanger)Alg14 (PF08660)   
Domain families : Pfam (NCBI)pfam08660   
Conserved Domain (NCBI)ALG14
DMDM Disease mutations199857
Blocks (Seattle)ALG14
SuperfamilyQ96F25
Human Protein AtlasENSG00000172339
Peptide AtlasQ96F25
HPRD14466
IPIIPI00061677   
Protein Interaction databases
DIP (DOE-UCLA)Q96F25
IntAct (EBI)Q96F25
FunCoupENSG00000172339
BioGRIDALG14
STRING (EMBL)ALG14
ZODIACALG14
Ontologies - Pathways
QuickGOQ96F25
Ontology : AmiGON-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity  endoplasmic reticulum membrane  dolichol-linked oligosaccharide biosynthetic process  integral component of membrane  nuclear membrane  
Ontology : EGO-EBIN-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity  endoplasmic reticulum membrane  dolichol-linked oligosaccharide biosynthetic process  integral component of membrane  nuclear membrane  
Pathways : KEGGN-Glycan biosynthesis   
NDEx NetworkALG14
Atlas of Cancer Signalling NetworkALG14
Wikipedia pathwaysALG14
Orthology - Evolution
OrthoDB199857
GeneTree (enSembl)ENSG00000172339
Phylogenetic Trees/Animal Genes : TreeFamALG14
HOVERGENQ96F25
HOGENOMQ96F25
Homologs : HomoloGeneALG14
Homology/Alignments : Family Browser (UCSC)ALG14
Gene fusions - Rearrangements
Fusion : MitelmanALG14/C1orf194 [1p21.3/1p13.3]  
Fusion : MitelmanALG14/NRD1 [1p21.3/1p32.3]  [t(1;1)(p21;p32)]  
Fusion : MitelmanCNN3/ALG14 [1p21.3/1p21.3]  [t(1;1)(p21;p21)]  
Fusion : MitelmanMYSM1/ALG14 [1p32.1/1p21.3]  [t(1;1)(p21;p32)]  
Fusion : MitelmanSGPP2/ALG14 [2q36.1/1p21.3]  [t(1;2)(p21;q36)]  
Fusion: TCGAALG14 1p21.3 C1orf194 1p13.3 BRCA
Fusion: TCGAALG14 1p21.3 NRD1 1p32.3 BRCA
Fusion: TCGACNN3 1p21.3 ALG14 1p21.3 GBM
Fusion: TCGAMYSM1 1p32.1 ALG14 1p21.3 BRCA
Fusion: TCGASGPP2 2q36.1 ALG14 1p21.3 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerALG14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ALG14
dbVarALG14
ClinVarALG14
1000_GenomesALG14 
Exome Variant ServerALG14
ExAC (Exome Aggregation Consortium)ALG14 (select the gene name)
Genetic variants : HAPMAP199857
Genomic Variants (DGV)ALG14 [DGVbeta]
DECIPHER (Syndromes)1:95448279-95538507  ENSG00000172339
CONAN: Copy Number AnalysisALG14 
Mutations
ICGC Data PortalALG14 
TCGA Data PortalALG14 
Broad Tumor PortalALG14
OASIS PortalALG14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICALG14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDALG14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ALG14
DgiDB (Drug Gene Interaction Database)ALG14
DoCM (Curated mutations)ALG14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ALG14 (select a term)
intoGenALG14
Cancer3DALG14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612866    616227   
Orphanet22137   
MedgenALG14
Genetic Testing Registry ALG14
NextProtQ96F25 [Medical]
TSGene199857
GENETestsALG14
Huge Navigator ALG14 [HugePedia]
snp3D : Map Gene to Disease199857
BioCentury BCIQALG14
ClinGenALG14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD199857
Chemical/Pharm GKB GenePA142672628
Clinical trialALG14
Miscellaneous
canSAR (ICR)ALG14 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineALG14
EVEXALG14
GoPubMedALG14
iHOPALG14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:55:32 CET 2017

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